Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4550 ATGGATTCTTCTATTGTTATGGTTAACACAAATTCAGAACCTAATGATGAAATGGAATTTGAATCTCATGAAACTGCATATACATTTTACAAAGAATATGCTAAATCTGTAGGGTTTGGTACTGCTAAATTAAGTAGTCGTCGATCTAGGTCATCGAAGGAATTTATCGATGCTAAGTTTTCGTGTATAAGATATGGTAATAAACAACAATCGGACGATGCGATTAATCCGCGTCCTTCGCCGAAAATTGGTTGTAAAGCTAGTTTGCATGTGAAGAGAAGACAAGATGGTAAATGGTATGTTTATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTCTTTCGAAGTCATAGGAATTCGGATCCGTTAAGTAATGATGTGCGGATGCGACGGAGGAAGAACTCAACTGCAGGTGGTAAATTGTTTAGTGCGTATCAGAATGTTGATTGTTTAGAGAATTTTATGAATCGTCAGCAGGATAAAGGACGTAGTTTGGTTTTAGAACCGGGGAATGCTCAATTGCTTCTTGAATTATTCATGCATATGCAGGAAGAGAATCCTAAATTCTTCTATGCAGTTGATTTGAATGAAGAGCATCGACTTAGAAATGTGTTTTGGGTTGATTCTAAAGGGTTAGAAGATTTTTGTTATTTCTCTGATGTTGTTTCTTTTGACACAACATATTTCACAAGCAAGTATAAAATACCTTTGGTGCTTTTCATTGGAGTTAACCATCATATGCAACCCACATTGCTTGGATGTGCATTGATAGCTGATGAGTCAGTATTTACTTTTGCTTGGTTACTGCAAACGTGGTTTATAGCAATGGGGGAACGTGCTCCACAAGTGATTCTGACCGACCAAAACGATGCTCTTAAAGCTGCTGTCGCTGCTGTTTTTCCAGGAACACGTCATTGTTTTTGTTTGTGGCATGTTTTGGAAAAAATACCGAAACAGCTTGAATTTTTAAGTACATGGCATGATAGCTTTATGGAAAAGTTTAACAAATGTATATATCAATCATGGACAGAGGACCAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATATTAAGTGGGTCCAATCCTTGTATGATGATCGAGCAAGTTGGGTGCCAACTTTTATGAGGGATATTTCTTTTGCTGGCCTGTCTACTAGCTCGCGCTCAGAAAGTTTAAATTCTTTTTTTGATAAATATGTCCAAGTTGATACTTCATTGAGCGAATTTATAGAGCAGTACCAGCTGATTCTTGAAGATAGACATGAAGAAGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACGCCCGAATTAAAGTCTCCTTCCCCTTTTGAAAAACAATTGTTGTTAGTTTATACGCACGAAATCTATCAAAAGTTCCAGTTTGAGGTTTTGGGTGCTTCTGCTTGCCATCTAAAGAAAGAAAATGATGGCGTGATTACTACTTATGATGTGAAAGATTTTGAAAATAATCAGAATTACATGGTAGAATGGAACACATCAAACTCAGATATATGTTGTTCCTGTCACTTGTTTGAATATAAAGGTTACCTCTGTAGACATGCAATTGTTGTTCTACAAATGTCTGGAGTGTTTAGTATCCCGCCAAAGTATATATTGAAAAGATGGACAAATGCTGCTTTAAGTAAGTATCCTATTAGTGAAAAATTGGAAGAGGTTCAATCCAAGGTCCGGAGATTCAATGATTTATGTAGACGAGCCATAATATTGGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACTATATGGCTTTAGGTGCCTTAAGTGAAGCTCTAAAGCAATGTGTAAATTTTAACAACTCTGTTGAGAATGCAGCGTTAGCTACCCATGTTGATTGCAATGTTGAAGAAGAGTATCAATCTACTACTACTACATCTAATGATAAGTTTTCTGATCCAAAAATGAAGACGGGTAAGAAGGCTGCGAGGACTGGTGTGGCTGCTCGGAGTCTAGGAAGTGTTGAAAATATCGAAGGAAATAAAAGAAAGGTGCCTCAGCTTGGAGCAGTAAGTGGTAGCAACGATGGTTTTCAACAAATGGAGCCTAATGATCTAAGGTCACATAATGCCATGCAAATGCAGTTTCACAGCATGGTGCCGGCAACTATGTTCCATAATGTTTCGTCCCCCTTTCACACTGCAACCTCAACTCATTTGCATGACAATCATCTTCCTCCTTAG 2238 0.3762 MDSSIVMVNTNSEPNDEMEFESHETAYTFYKEYAKSVGFGTAKLSSRRSRSSKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASLHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRNSDPLSNDVRMRRRKNSTAGGKLFSAYQNVDCLENFMNRQQDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDSKGLEDFCYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHMQPTLLGCALIADESVFTFAWLLQTWFIAMGERAPQVILTDQNDALKAAVAAVFPGTRHCFCLWHVLEKIPKQLEFLSTWHDSFMEKFNKCIYQSWTEDQFEKRWWKLVDRFKLRDIKWVQSLYDDRASWVPTFMRDISFAGLSTSSRSESLNSFFDKYVQVDTSLSEFIEQYQLILEDRHEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVITTYDVKDFENNQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILKRWTNAALSKYPISEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYMALGALSEALKQCVNFNNSVENAALATHVDCNVEEEYQSTTTTSNDKFSDPKMKTGKKAARTGVAARSLGSVENIEGNKRKVPQLGAVSGSNDGFQQMEPNDLRSHNAMQMQFHSMVPATMFHNVSSPFHTATSTHLHDNHLPP* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4550 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 705 IPR031052 GO:0006355
Tpr7g4550 745 SMART 26again6 517 544 IPR006564 GO:0008270
Tpr7g4550 745 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Tpr7g4550 745 MobiDBLite consensus disorder prediction 640 663 - -
Tpr7g4550 745 Pfam SWIM zinc finger 512 540 IPR007527 GO:0008270
Tpr7g4550 745 Pfam MULE transposase domain 227 320 IPR018289 -
Tpr7g4550 745 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Tpr7g4550 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4550 Tpr-Chr7 54008093 54011918 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g4550 MULE 3.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4550 - - gmx:100805273 1268.06