Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4548 ATGGATCCACCAACACCACCCAATAATGAACAAAACCTTAACCTCAACAACCTAAAACCACTCAAAATCTTAGGTAAAGGTGCAATGGGAACCGTTTTCCTCATTCAACAAAACAACAACTCCAACATGGCACTCAAAGTAGTTGATAAATCCTCCACTCACGACGCCGAACGTCGCGCCCGTTGGGAAATCCAAGTCTTATCAACTCTGGCCCACCCATTTCTCCCCTCGCTCCTGGGCTCATTCGAAACAGCTCACTTATTAGGCTGGGCTGTTCCGTATTGCCCGGGAGGCGATCTCAATGTGCTCCGTTACCACCAAACGGATCATGTCTTCTCAACAACCGTTATCCGTTTCTACATAGCAGAAATTCTCTGCGCTCTCGACCATCTTCATACAATGGGCATCGCTTATCGTGACCTTAAACCAGAAAACATTCTTATTCAACAATCTGGCCACGTCACCTTAACTGATTTCGATCTCTCACGTAAACTCACTCACAAAACCGTTAAAATTGAAACCGTCGATAACAGTATCCATGAAACTCGCCGCAAAACTCGGCGGTGGCGAGTCCCACTGACGGAACCTAACGGAAAGATAGCACGAGTTATTCCGGTGAGTCGACGCGGTGTGAGTTTCTCCGACGGTGAAAGGTCTAACTCGTTTGTCGGTACGGCGGAGTACGTCGCGCCGGAGGTTATACGCGGCGACGGACATGAATTCGCGGTTGATTGGTGGGCGTTTGGAGTTTTAACTTACGAGATGTTGTATGGGAAAACGCCGTTTAAGGGGAAGAATAAGAAGGAAACGTTTCGAAACGTGCTTTTCAAGTCGCCGGAGTTTGTTGGAAGAAAAACGGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAAGATCCGTTGAAGCGATTTGGTTATGGTGGTGGAGCTAATGAGATAAAAGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCGCCGTTTATTCCGTCAAAAGATGACGGTTATTTAACGGCGGAGAAATTTGGTGAGGGAATAGTGAATATAAGTGATTATTTTGAGAAGTTGAAATCTCCGGCGGTGGTGTTGCCGTCTTCGCCGTTACGGTCACCGTCTTCTGAGTTTCGGGATAGTGTTTCTTTTGATGAGTTCTGA 1176 0.4668 MDPPTPPNNEQNLNLNNLKPLKILGKGAMGTVFLIQQNNNSNMALKVVDKSSTHDAERRARWEIQVLSTLAHPFLPSLLGSFETAHLLGWAVPYCPGGDLNVLRYHQTDHVFSTTVIRFYIAEILCALDHLHTMGIAYRDLKPENILIQQSGHVTLTDFDLSRKLTHKTVKIETVDNSIHETRRKTRRWRVPLTEPNGKIARVIPVSRRGVSFSDGERSNSFVGTAEYVAPEVIRGDGHEFAVDWWAFGVLTYEMLYGKTPFKGKNKKETFRNVLFKSPEFVGRKTALTDLIERLLEKDPLKRFGYGGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSKDDGYLTAEKFGEGIVNISDYFEKLKSPAVVLPSSPLRSPSSEFRDSVSFDEF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4548 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Tpr7g4548 391 Gene3D Phosphorylase Kinase; domain 1 18 98 - -
Tpr7g4548 391 Pfam Protein kinase domain 21 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4548 391 Pfam Protein kinase domain 215 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4548 391 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 13 367 - -
Tpr7g4548 391 ProSiteProfiles AGC-kinase C-terminal domain profile. 320 391 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr7g4548 391 SUPERFAMILY Protein kinase-like (PK-like) 15 370 IPR011009 -
Tpr7g4548 391 Gene3D Transferase(Phosphotransferase) domain 1 216 338 - -
Tpr7g4548 391 PANTHER FLIPPASE KINASE 1-RELATED 13 367 - -
Tpr7g4548 391 SMART serkin_6 18 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4548 391 Gene3D Transferase(Phosphotransferase) domain 1 99 169 - -
Tpr7g4548 391 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
Tpr7g4548 391 ProSiteProfiles Protein kinase domain profile. 18 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4548 Tpr-Chr7 53977860 53979483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4548 12 371 AGC Kinase Gene Family AT1G51170 60.367 2.25e-156 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g4548 Pkinase 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4548 - K08286 gmx:100785281 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4548 7 53977860 53979483 Tpr3g2151 3 19822534 19824269 PCT