Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4541 ATGAGTACTCATCCCTACTTCTCCAATAACTTCAATGGTTATAATACTTATTTTGACCTAAATAACCCTCCATTCTATAATTTTCCTTCTAATTACCATCAAAACAACATATCTTTTACATCTTCTCCTTCATCTCCACCTCAAAGACAAGCTCTTCCTTTACTTAACCTAAGCCCTACAAAACATCATGAAGATCTTCTTCTTCAAGAATCTTCCTTTAGTTGTTCTTCCATGGAAATAATGAATATGAAAGAGAAAGAACAACAACTAAGTATATCATCAAATTCTTTAGATGATGATGATGCTGTTACTGTGGCTTTACATTTAGGGCTTCCAAGTATAAGCTCAACTGATTTAGCTTCTTCAAACATGTATGTTGATTCAGAGAAAGATGATGAAAAAGTAGTAACTGTTGCTTCTTCTTCTTCTTCTGAGTGTCCACTGAATAAAATTAATAGAGGTCAGTATTGGATCCCTACCCCTGCTCAGATTCTGATTGGTCCAACACAATTTTCATGCCCTCTTTGTTTCAAAACCTTCAATAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATATAGAAAAGGACCAGAATCACTAAGAGGAACACAACCAACAGCAATGCTAAGACTCCCATGTTATTGTTGTGCACCTGAATGCAAGAACAACATTGATCATCCAAGAGCAAAACCACTAAAAGATTTTAGAACACTTCAAACACATTACAAAAGAAAGCATGGAATAAAACCATTTATGTGTAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGTGATTGGAGAACTCATGAGAAAAATTGTGGTAAACTTTGGTATTGTTCTTGTGGGTCCGATTTTAAGCACAAAAGATCATTAAAAGATCATATCAAAGCTTTTGGAAATGGACATAAAGCTTATGGAATTGATGAATGTCTTGATCAAGATGATGAACATGGTGGCTCTGAAATTGAGCAAGAAAATGAATCTTTTCAGTCATAG 1008 0.3502 MSTHPYFSNNFNGYNTYFDLNNPPFYNFPSNYHQNNISFTSSPSSPPQRQALPLLNLSPTKHHEDLLLQESSFSCSSMEIMNMKEKEQQLSISSNSLDDDDAVTVALHLGLPSISSTDLASSNMYVDSEKDDEKVVTVASSSSSECPLNKINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDECLDQDDEHGGSEIEQENESFQS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4541 335 PANTHER ZINC FINGER PROTEIN WIP2 30 334 IPR043584 GO:0003700|GO:0010468
Tpr7g4541 335 Gene3D Classic Zinc Finger 170 193 - -
Tpr7g4541 335 ProSiteProfiles Zinc finger C2H2 type domain profile. 171 198 IPR013087 -
Tpr7g4541 335 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 30 334 - -
Tpr7g4541 335 SUPERFAMILY beta-beta-alpha zinc fingers 237 275 IPR036236 -
Tpr7g4541 335 ProSitePatterns Zinc finger C2H2 type domain signature. 173 193 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4541 Tpr-Chr7 53933346 53936574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4541 31 328 C2H2 Transcription Factor Family AT1G51220 61.489 8.51e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4541 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4541 - - gmx:100789416 483.796