Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4516 ATGAATGGATTAACCCTTCTACCTAACATGTTACTTTCTCTTCAACCCACTCACCACCGATTTCTTCAACCATCTTCATGTTTCCAATGCTTCCAAAACCAAACAAATTGTTCAATTTCCATACCCAGTTGCAAAATCAGTCACAAAAGATTTATATATCATCATGAGAACAAAAGAAGAGGTGGCAATAGAATAACGTTTGTTGTAAGAGCAAAGCGTGGTGAATCTCCTTATGAAGTTCTGGGTTTGTCTCCTTCTGCATCTGTGAATGAAATCAAGAAAGCCTATAGGAAACTCGCTCTTAAGTATCATCCTGATGTTAATAAAGAGGATAAGGCTCAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGTTAAATTCTAGTTCTCGCAAAAAATATGATTCTGGAAGTCGTGGTTATAATTCATCTCAAAGAAGCCAAAGTCGGAATCCACAAGCTGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGAGATGCTCAAATAACAATAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCCAGTGCAGCTTCACAAGGAAAGCCAAAGAGCCTATGGGAGGAATTGTCGGAAATTGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAATATTGTTGATCAAAATGACAATCCTCAGGGAGGAAATCGATCCAATTTATACGAGACAGAGACATCAAGCAACAGCACTCAAGGCAAAGCTAGCAAGGGAAACACAAGCGTTGAGGATAACCTCGATGAAATAGAAGCCACTCTAGCACAGTTAAAAAAGGAGTTAGGCTTATAG 837 0.3763 MNGLTLLPNMLLSLQPTHHRFLQPSSCFQCFQNQTNCSISIPSCKISHKRFIYHHENKRRGGNRITFVVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGYNSSQRSQSRNPQAEEEFYGLGNFLRDAQITIGDFFKDLQEEFRNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDQNDNPQGGNRSNLYETETSSNSTQGKASKGNTSVEDNLDEIEATLAQLKKELGL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4516 278 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Tpr7g4516 278 Coils Coil 255 275 - -
Tpr7g4516 278 MobiDBLite consensus disorder prediction 223 262 - -
Tpr7g4516 278 Pfam DnaJ domain 77 137 IPR001623 -
Tpr7g4516 278 Gene3D DnaJ domain 74 195 IPR036869 -
Tpr7g4516 278 ProSiteProfiles dnaJ domain profile. 76 140 IPR001623 -
Tpr7g4516 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 40 276 - -
Tpr7g4516 278 MobiDBLite consensus disorder prediction 133 156 - -
Tpr7g4516 278 CDD DnaJ 77 129 IPR001623 -
Tpr7g4516 278 SUPERFAMILY Chaperone J-domain 43 136 IPR036869 -
Tpr7g4516 278 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 276 - -
Tpr7g4516 278 SMART dnaj_3 75 132 IPR001623 -
Tpr7g4516 278 PRINTS DnaJ domain signature 78 96 IPR001623 -
Tpr7g4516 278 PRINTS DnaJ domain signature 96 111 IPR001623 -
Tpr7g4516 278 PRINTS DnaJ domain signature 112 132 IPR001623 -
Tpr7g4516 278 MobiDBLite consensus disorder prediction 223 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4516 Tpr-Chr7 53761012 53764253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4516 78 138 C2H2 Transcription Factor Family AT1G74250 41.791 1.08e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4516 - - mtr:MTR_2g097690 402.134