Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4506 ATGGATCCAAACTTCTTAGGATTTGAAACAACCTTTGAAATCGATGACTATGGTAACATTCAACTCCTCTCCGACCAAAATCCAACCACTAATGATCCTTATTTCTATCCACCACCCTATATGGACCCACCACCACCGAGTTATTCTAACTCACTTTTCAACTCGGAGGAGGAGCCACTAGTTTCCACTGATCCTTCTTTTGAAGACACTGATTTTTCAGAAACTGTTAAATACATAAGCCAAATTCTCATGGAAGAAGATTTTCAACAAAAACCATGTATGTGTTATGACCCAATTACCCTTCAACATACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAAATCGCCTCTTCTTTCACCTAATCAACACCCTCTTGATTTTCTTCAGATTCCTAATGGGAATTCTTCAGCTACTGATTCTGGAAACAGTTCTTGTTCTAATGAGTTGTTGAAGCCTCTTTCTCCTGATACACCTGTTTCAGGTAGTACTGATTCTGGTTTTAGTTCAATTTCAAGTGTTAAGTTTGATCAGTTTATTGTTCCTAAACATGGTTTGAATAAAAATAATAATGATAATAGTATTAGTGATGGTGTTTTGGATTTGGATTCTTCTGAAACTAAGGTTTTAGCTCAGAATATTTTTAGTGATGTTGATTCTATGTTGCAGTTTAGAAAAGGGTTAGAGGAAGCTAGTAAATTTCTTCCTCAAAAGCCTCAGCTTTTTACTGGTTTGGAGAATATTAGTAATAGTTTAGTGTCTCAAGAGTCTAAGGGAAGGGTTGAAGTGATTAAGATGGAGGGTAGTGATAGGGAAAATTCAAATTCTAGTTATTCGATAAATTCGAGTTCACGTGGTTTGTTGAAGAGTAGAAAGAATCATGAGCGCCAAAGTAGTGAAGATGAAGAAGGAAGAAGTAATAAACAGTCTGCAGTTTGTGTTGAGGAGAGTGAAATAACTGAGATGTTTGATAGGGTTTTGCTTAGTGTCGAAAATGTGCCGTTGTGTGCTGAAAACAAGGATGGATCGGTGGTGGATAGTAGCGGAAAGGTTGGTGAACCTGATGGAAGAGGGAAAGCGCGTTCCAAGAAACCAGGGAAGAAGAGGGAAACTGTGGATTTGAGGACCCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGCTAGTGATAACAGGACTGCTAATGAATTGTTAAAGCAGATTAGGCAACATTCTTCTCATTTAGGTGATGCACCGCAGAGGTTGGCTCATTACTTTGCAAACGCGCTCGAAGCGCGCATGGTTGGTGCTGGTGCCGGTACACAAATATTATATATGAGCCAGAAGATGTTTAGTGCTGCTGATTTCTTGAAAGCTTACCAAGTTTTTATATCTGTTTGCCCTTTTAAAAAAATTGCACATTTCTTTGCAAATAAAATGATTTTGAAAACAGCTGAAAAGGCAAAAACCCTTCACATTATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAAAAGAGTTGGTGGACCTCCCAAGTTACGCATCACCGGAATTGAGTATCCCCAAGCTGGCTTTCGACCGGCTGAAAGAATCGAGGAAACTGGCCGACGTCTAGCTAACTATTGTCAGCGTTTCAATGTTTCATTTGAATACAAGGCCATACCATCGCGACATTGGGAAACCATTCAAATTGAAGATCTTAATATTAAGAGCGACGAGGTAGTTGCTGTGAACTGTCTGATAAGGTTTAAGAATTTACATGATGAGACAATTGAAGTAAACAGTCCCAAAGATGCAGTTCTGAAGTTAATCAGGAAGATAAATCCGAGTATATTTGTTCAATCCATAGTAAATGGAACTCATAATGCACCTTTCTTTTCCACGCGCTTCAAGGAGTCGCTTTTCCATTATTCTGCAACGTACGATATGTATGATACTCTCATATGCCGTGAAAATGAATGGAGGTTGACGCTCGAGAGAGAGTTTTTGGGTCGGGAGATTATGAATGTCGTAGCATGTGAAGGTTTAGAGAGGGTTGAGAGGCCTGAGACTTATAAACAGTGGAAGGTTAGGAATCTTAGGGCTGGTTTTAGACAGCTCCCACTGGATAAGGATATAATGGACAACTTTAGAGGTAAGCTGAGAGCATGGTACCACAAAGATTTTGTCTTTGACGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTGTATGCTTCGGCTTGTTGGGTGCCAGCATAA 2250 0.3924 MDPNFLGFETTFEIDDYGNIQLLSDQNPTTNDPYFYPPPYMDPPPPSYSNSLFNSEEEPLVSTDPSFEDTDFSETVKYISQILMEEDFQQKPCMCYDPITLQHTEKIFFDALESKSPLLSPNQHPLDFLQIPNGNSSATDSGNSSCSNELLKPLSPDTPVSGSTDSGFSSISSVKFDQFIVPKHGLNKNNNDNSISDGVLDLDSSETKVLAQNIFSDVDSMLQFRKGLEEASKFLPQKPQLFTGLENISNSLVSQESKGRVEVIKMEGSDRENSNSSYSINSSSRGLLKSRKNHERQSSEDEEGRSNKQSAVCVEESEITEMFDRVLLSVENVPLCAENKDGSVVDSSGKVGEPDGRGKARSKKPGKKRETVDLRTLLVLCAQAVSASDNRTANELLKQIRQHSSHLGDAPQRLAHYFANALEARMVGAGAGTQILYMSQKMFSAADFLKAYQVFISVCPFKKIAHFFANKMILKTAEKAKTLHIIDFGILYGFQWPILIKFLSKRVGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCQRFNVSFEYKAIPSRHWETIQIEDLNIKSDEVVAVNCLIRFKNLHDETIEVNSPKDAVLKLIRKINPSIFVQSIVNGTHNAPFFSTRFKESLFHYSATYDMYDTLICRENEWRLTLEREFLGREIMNVVACEGLERVERPETYKQWKVRNLRAGFRQLPLDKDIMDNFRGKLRAWYHKDFVFDEDNNWMLQGWKGRILYASACWVPA* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4506 749 PANTHER SCARECROW-LIKE PROTEIN 34 53 748 - -
Tpr7g4506 749 MobiDBLite consensus disorder prediction 344 369 - -
Tpr7g4506 749 Pfam GRAS domain family 374 746 IPR005202 -
Tpr7g4506 749 ProSiteProfiles GRAS family profile. 365 747 IPR005202 -
Tpr7g4506 749 MobiDBLite consensus disorder prediction 266 312 - -
Tpr7g4506 749 MobiDBLite consensus disorder prediction 352 369 - -
Tpr7g4506 749 MobiDBLite consensus disorder prediction 270 287 - -
Tpr7g4506 749 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 748 IPR005202 -
Tpr7g4506 749 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4506 Tpr-Chr7 53676539 53679709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4506 75 749 GRAS Transcription Factor Family AT1G07530 49.083 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g4506 GRAS 1.7e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4506 - - cam:101504630 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4506 7 53676539 53679709 Tpr3g2089 3 19252523 19253391 PCT