Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4505 ATGTTTTTTGTAGGTATTGTTCTTGATTCTGGGGATGGTGTTAGTCACACGGTTCCCATCCATGAGGGTTATGCACTTCCACATGCAATCCTTTGTTTGGATCTTGCAGGCCGCGATCTAACTGATATGTTGATGAAGATTTTAACCGAGCGTGGTTACACTTTCACTACTTCTGCAGAGCGTGAAATTGTGAGGGATGTGAAGGAGAAATTGGCTTATATTGCTATTGATTATGAGCAGGAGTTGGAAACTGCTAAGACTAGCTCAGCTGTTGAGAAGACCTATGAGTTACCTGATGGGCAGGTGATCAAAATCGGTGCTGAAAGGTTCCGATGCCCTGAAGTTTTGTTCCAGCCATCCATGACAGGGATGGAATCTCCTGGTATCCATGAGACGACGTTTAACTCGATCATGAAGTGTGACGTCGACATTAGGAAGGATCTCTATGGTAACATTGTCTTGAGTGGTGGTTGGACAATGTTCCCTGGTATTGCTGATAGAATGAGTAAGGAGATTACCGCATTGGCACCTAGTAGCATGAAAATCAAGGTTGTAGCACCACCAGAGAGGAAGTACAGTGTCTGGTTAAACATCATCACCTGA 603 0.4428 MFFVGIVLDSGDGVSHTVPIHEGYALPHAILCLDLAGRDLTDMLMKILTERGYTFTTSAEREIVRDVKEKLAYIAIDYEQELETAKTSSAVEKTYELPDGQVIKIGAERFRCPEVLFQPSMTGMESPGIHETTFNSIMKCDVDIRKDLYGNIVLSGGWTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWLNIIT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4505 200 PANTHER ACTIN-7 4 196 - -
Tpr7g4505 200 Pfam Actin 5 196 IPR004000 -
Tpr7g4505 200 SUPERFAMILY Actin-like ATPase domain 5 196 IPR043129 -
Tpr7g4505 200 SMART actin_3 1 199 IPR004000 -
Tpr7g4505 200 Gene3D Actin; Chain A, domain 4 35 126 - -
Tpr7g4505 200 PANTHER ACTIN 4 196 IPR004000 -
Tpr7g4505 200 Gene3D - 5 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4505 Tpr-Chr7 53673272 53673889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4505 5 197 Cytoskeleton Gene Families AT5G09810 90.155 4.79e-128 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4505 K10355 - gmx:100807341 362.073