Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4503 ATGTTTCAGTGGCTTACAAATTTACTATGTGCTTGCACAACCAACACAAGCAAAAACACTGTCGACATTAATGAATTTGATGAAGATCCTTTAGGGTGGTCGCGGGACCTGCTAGAACAACAATTGGGCGAATTCTCCATGGCTGCGGTTAAGGCAAATGATGTTATGGAGGATCACAGCCAGCTTGATGTTGGCAAGAAAGCACTCTTTGTTGGAATTTATGATGGCCACAATGGTGCTGAGGCTTCCAACTTCTTGATTACTAATCTCTTTGAGAATCTAATCAGGATTATTCAGGAGAATAATAATAATGTATCTGAAAATATTCTGAGGCAAGTTGTCGCTGAAATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAACGGCCAGAGCTAGCTCTAGTAGGTTCAAGTTGTCTGTTTTGTATGGTATGGAGAGGGAGGCTATATATCGCTAACGTTGGAGGCTCTCGTGCTGTAATGGGCTCTTTGGATCCATTTGATAGATTCAATGTTAGGCAGTTGGTCGAAGATCACAATGCTCGTAACAGGCATATTAAAAAAGAACTCAAGAAGTTGCATCCAAATAATCCGACTATTGTGACATATAATTTTGATGCATGGCGTGTTGGAGGCATAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACCATTCACTCTAACCTCATCCTTCCGAGTCCCACAGTTGGAACTTGCACCTTCTGATTTTACCCGACCTTTGCTATCAGCAGAACCTGCAATATCTTCAAGAGTCTTAAATGACGTCGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGTCAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTACAGATTGCAGCTAGAAGAAATAATATGAGCTATAGTGAGCTTTCGAAGATTCATGAGACATGGTGTTGGCGTATTCAGCGGAATAATAACAATATGAATATAAATATTCTGATGCGAGCTGTTGCCCGACTTGAGAGAGCTTTTTTGGAGTCTGCTGGAAGAAATGTTTTTGTTAGTTCAGGTTGTTTGATTTGTTTCATACGGAGAGGGACATTATATGCCGCCAACGTGGGAGACTCGCACGCTGTACTCGGTTCTCTGATGGGAGATATTCAAGATCTCTCTGATGACAAAGGTTCAATCGAGACAACTAGATGTATAGGATATGCATATTTGAAGAAGGAGATCAATATCAATGAAAGCGAAATCCCATATTGGTATTCGCTAGTAATGACGGATGCTTTATCCACCACGGTAGCTCCATTATCCACCACGACGGATGCTTTATCAATCTCTTTTATCCTTCGACAAGTTGTCATAAGTTACATAGCCATCTTCTTGTTAGGTATCGAGCATTTTTCTGTAAAGCTAGTAATGATAATAGTTATTGAATTTAATGAGATGAAAAATTAG 1506 0.3997 MFQWLTNLLCACTTNTSKNTVDINEFDEDPLGWSRDLLEQQLGEFSMAAVKANDVMEDHSQLDVGKKALFVGIYDGHNGAEASNFLITNLFENLIRIIQENNNNVSENILRQVVAEMEELFMTDVEEGNQQRPELALVGSSCLFCMVWRGRLYIANVGGSRAVMGSLDPFDRFNVRQLVEDHNARNRHIKKELKKLHPNNPTIVTYNFDAWRVGGISEVSRCIGNAYLKRAPFTLTSSFRVPQLELAPSDFTRPLLSAEPAISSRVLNDVDKFIIFGSGGLWKLLSNWQAAEIVHTNPRDGIAKRILMTALQIAARRNNMSYSELSKIHETWCWRIQRNNNNMNINILMRAVARLERAFLESAGRNVFVSSGCLICFIRRGTLYAANVGDSHAVLGSLMGDIQDLSDDKGSIETTRCIGYAYLKKEININESEIPYWYSLVMTDALSTTVAPLSTTTDALSISFILRQVVISYIAIFLLGIEHFSVKLVMIIVIEFNEMKN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4503 501 SUPERFAMILY PP2C-like 336 424 IPR036457 -
Tpr7g4503 501 Gene3D - 34 339 IPR036457 -
Tpr7g4503 501 PANTHER ALPHABET, ISOFORM E-RELATED 12 330 - -
Tpr7g4503 501 PANTHER ALPHABET, ISOFORM E-RELATED 335 398 - -
Tpr7g4503 501 SMART PP2C_4 38 325 IPR001932 -
Tpr7g4503 501 CDD PP2Cc 53 321 IPR001932 -
Tpr7g4503 501 ProSiteProfiles PPM-type phosphatase domain profile. 41 327 IPR001932 -
Tpr7g4503 501 SUPERFAMILY PP2C-like 52 320 IPR036457 -
Tpr7g4503 501 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 335 398 - -
Tpr7g4503 501 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 330 - -
Tpr7g4503 501 Pfam Protein phosphatase 2C 65 313 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4503 Tpr-Chr7 53658984 53663551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4503 31 328 PP2C-type Phosphatase Gene Family AT5G06750 46.026 6.44e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4503 K01102 - pvy:116121639 296.975