Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4492 ATGTTTATTTCCAAGTTTATATATTTTGGAAATATCTCTTACAATGGTTACTATAGGTTGAAAATCTCAGGTTCAACATATAGATGTCCATTCTGTAACAACAAGGATTATTACTCTTTGAGTGAGCTTCTGAGACATGCTTCTAGAATAACCGGTGACTCGCGCGAGACAATAAAGGAAAGTGCTAAACACTCTGCACTTCAAAGGTACATTGGTAAAGACAAGTCACCTGCTGTTAAAGCAACTTGTAAAGATAAGTTACCTGCTTTGAGTGTTTCTATTGATAAGGATAGTTCACATAATGTTAACATTGCTGAGAACCAGTCACCGAATGAGATTGTTGCTGGTGATGAATTGTTTGTCTGGCCATGGATGGTAATTCTGGCAAGCAATGTTACCACATTTGACCCGAAGAGCGGAAAGCGTGTTGGAAAGAAACATAATGAAATTAAGGAGGAGCTGCTCTTGAAAGGGTTTCAGCCGGTGAAAGTTACTGCGCTGTGGAACCATAACGGACAAACACCTTTTGCAATTGTTGAATTTGGAAAAGAGTGGGATGGTTTCCACAATGCTATGATGTTAGAAAGGCGCTTTCAAGCAGATCATTGTGGTAAGAAAGATTACTTGAATTTACGGCAGCAGGATCGAGGAGATAGACTCTTTGGGTGGATGGCACGTGGTGACGACTATAATAATGTTAGGGATATATTTGGGAAACACCTCCGGGATAACGGGGATTTGAAAACTGTTTCTGGAAAAGAAGCCGAGGACGATAGGAAAGCAAAGAAGCTTGTCTTTGGCTTGGCGAATACTTTAATGCTGAAGAACAGGGAATATGAACAGACAGCAAGCAAATATCACGAGGCTAGTCAATACCTAACGAAAGTAATGGTTGAAAAAGAGGAGATGGTTGAACATTTTAATAACGGTATGCTGATGCTTAAATTGAATTGTTCTAATTAA 963 0.3936 MFISKFIYFGNISYNGYYRLKISGSTYRCPFCNNKDYYSLSELLRHASRITGDSRETIKESAKHSALQRYIGKDKSPAVKATCKDKLPALSVSIDKDSSHNVNIAENQSPNEIVAGDELFVWPWMVILASNVTTFDPKSGKRVGKKHNEIKEELLLKGFQPVKVTALWNHNGQTPFAIVEFGKEWDGFHNAMMLERRFQADHCGKKDYLNLRQQDRGDRLFGWMARGDDYNNVRDIFGKHLRDNGDLKTVSGKEAEDDRKAKKLVFGLANTLMLKNREYEQTASKYHEASQYLTKVMVEKEEMVEHFNNGMLMLKLNCSN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4492 320 Gene3D XS domain 114 287 IPR038588 -
Tpr7g4492 320 Pfam XS zinc finger domain 29 67 IPR005381 GO:0031047
Tpr7g4492 320 CDD RRM_like_XS 120 230 IPR005380 GO:0031047
Tpr7g4492 320 Pfam XS domain 117 231 IPR005380 GO:0031047
Tpr7g4492 320 PANTHER FACTOR OF DNA METHYLATION 4 20 315 - -
Tpr7g4492 320 PANTHER RIBONUCLEASE P SUBUNIT P38 20 315 IPR045177 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4492 Tpr-Chr7 53592945 53593907 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4492 XS 2.7e-34 CL0221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4492 - - mtr:MTR_4g046643 394.815