Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4490 ATGACGAAACCTTCTTTGCATTTACACAAGGAGGGTTTTAATTTCTTAAACCGATCAAGTTGCACACTCAATGACATATTTGATGGTGGTGATGGTATAATCCGTTCGGCCGTCTGGTATCAAGTTCTGATCGGGTCATCCACCATTCATTTCAATTTTGTTTTAATTTCTCAAACTTTAGACCTTTCTGTTTCCGCTGTATCAGGGCCTCAGAATGCTAGAAGAAGTGACCGTGATATCTTGCTGTCGTCCAATTTGAAGAGATATACCTTTGCAGAACTTGAGATAGCCACTGGAAATTTCCATCCATATAGTATAATAGGAGATGGTGGTTTTGGATTGGTTTATAAGGGGTGGATTCATCAGAATTCATTGGCTGCTACCAAACCTGGCACTGGCATTGCTGTTGCTGTCAAAAGACTAAGACCAAAGAGCTTACAGGGTCATAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGAAAGTTTTCTCATCCTAATTTAGTGAGATTGATTGGTTATTGCCTTGAAGATGAATGCCGCCTTCTCGTATATGAACTTATGCCCCTTGGAAGCTTGGAAGATCACTTGTTCAGCAGATATCGAAAGCGAGAGCCAGATCCAGATGCTGTCGAACCTCTTTCTTGGAGCATCCGTCTGAAGGTTTCTCTTGATGTTGCCAAAGTGCTTGCATTTCTGCACAGTGCTACAACAAAAGTGATATATAGAGATTTCAAGACTTCAAATATCTTGTTGGATTCTGATTATAATGCAAAGCTTTCTGATTTTGGACTGGCAAGGGATGGTCCGAATGACAACGGAAGCCACGTCTCCACCAGGATAATGGGAATTGAGGGATATGCAGATCCCGAATATGTAGACTCGGGCCATCTTACTACTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTGGAAATATTAACTGGTGAGTTGGTACTTGACATGACTAAATATGGAAGTGACAACTTGGTGGAATACATAAAGCCGCACCTGGCCGACAAAACCAAGATTTTCGGTCTGTTGGACAGTGAGCTTAAAGGGCAGTATTTGACAGAAGAGGCATACAAGGTAGCCACTCTTGCTCTGCAATGCCTATCATTAGAGTCCAAGTTCAGGCCTAACATGGATGAAGTTGTTAGAACTTTGGAGAAGCTGCAAGTTCCTAATTTGAATGTAGGCAATCTAAAGCATGCTGATGGACAATCTCTAAACTTGGTAGAACTGACTGTCCTGCAGACAGACCAGGGAATCCACCTTGCATGA 1284 0.4229 MTKPSLHLHKEGFNFLNRSSCTLNDIFDGGDGIIRSAVWYQVLIGSSTIHFNFVLISQTLDLSVSAVSGPQNARRSDRDILLSSNLKRYTFAELEIATGNFHPYSIIGDGGFGLVYKGWIHQNSLAATKPGTGIAVAVKRLRPKSLQGHREWLAEVNYLGKFSHPNLVRLIGYCLEDECRLLVYELMPLGSLEDHLFSRYRKREPDPDAVEPLSWSIRLKVSLDVAKVLAFLHSATTKVIYRDFKTSNILLDSDYNAKLSDFGLARDGPNDNGSHVSTRIMGIEGYADPEYVDSGHLTTKSDVYSFGVVLLEILTGELVLDMTKYGSDNLVEYIKPHLADKTKIFGLLDSELKGQYLTEEAYKVATLALQCLSLESKFRPNMDEVVRTLEKLQVPNLNVGNLKHADGQSLNLVELTVLQTDQGIHLA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4490 427 PANTHER OS01G0588500 PROTEIN-RELATED 62 409 - -
Tpr7g4490 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Tpr7g4490 427 Gene3D Transferase(Phosphotransferase) domain 1 187 405 - -
Tpr7g4490 427 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Tpr7g4490 427 PANTHER RECEPTOR-LIKE CYTOPLASMIC KINASE 176 62 409 - -
Tpr7g4490 427 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524
Tpr7g4490 427 Pfam Protein tyrosine and serine/threonine kinase 105 389 IPR001245 GO:0004672|GO:0006468
Tpr7g4490 427 SUPERFAMILY Protein kinase-like (PK-like) 78 389 IPR011009 -
Tpr7g4490 427 ProSiteProfiles Protein kinase domain profile. 101 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4490 Tpr-Chr7 53568834 53571467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4490 84 392 Receptor kinase-like Gene Family AT3G58690 43.730 1.55e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr7g4490 PK_Tyr_Ser-Thr 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4490 - - gmx:100798404 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4490 7 53568834 53571467 Tpr3g2073 3 19096189 19099246 PCT