Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4483 ATGGGAAAACAATTGATTAATTCAGAGGAATCCACTCAAATTCAAGAAGTTAATCAAGGATGCATGTGGGGAATGTTTAATATTCTTGATTACCATCATTGGGGTGTCAAAAAGGTGTTTCATCATAAAAAGAAAAGACATAACAGATATAAGAGAAAGATCACTCTGCAAGAGCAACATAATGTAGTTACAGAAGCAGAATCACACTTGGTCAGTCAACATAGAGAAATATCAAGTGCTAAAGGTCAAACTAGTAGTGAGAATGCACTTCATCAGAAGAAAGATGGAAATACAACAGAAAGTTCCCTTAAGAGAGACATTTCAATTAAATTTAAGAATAATGATGATGTTTTGGAGCTAATTAGTGTGGAGAAGAATTTGTTACTCAAATTTCTAAAAGATATAGACTTTGGTGGTAAAAAATATCATAAAGCTTCCCACAACAAAGCAACATTGACAAAATCGGGATCGTTTCCTTTACCTGCGTCTTCTAAGACGAAAAATATTAGCTCTAGTACCTTCCGAGCCAAGCAAACTGAAATTTGGGATTTTCCTAAGGGAGAAAAGTTGCGTGTCGGCACTCATGTACCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTCGTATGAAACGCTGAAGCCTTCCGCGACTGATAATGGAATTGATAGTGTCGTTGCCGTGGAACAAAAGTCAAGCATTTCTACGTGGTCTTCTGACGGATTAAACCACAAAGGATGGAATCAAGTGGTTACTCATCAGTTCAAAGTTATAAAACAGAAGATTAAACATGCAATTGTGGAATTAAAGAAAAGTGGTCACAGTAAAACTTCACCTGAATACAGCAACATTGATAATGAGAAAGAAATCTCGCAAAGCTTAGACGATGGTGCAATTCATGAATACAAAAAGAGTAGAAGCTTGAGTGAGACTAAAGCTTCTGAATCTGGTTCCAACAAACACAAACCTCACCTGATGCGAAGAACGTCTTCTCTTAACGAATCGATGGATAGATATACTCAATTGTTTGAGAAAAGTTTAAGCAAAGAGGTCAAGTGGCAAAGCTCAAAGTCGAAGAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTAAGCATGCTCGTATTTTCTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTTGAAACAAATGATATCGGAAATAATATAGTGGAAAGTGATAATGATGTTCAAAGTAAATCAGTGAGCCTTTCTTTAAAGAATGATAAATCAACCGATCATTTTAAAGAGGCTGAAATTGACGAAACAGTTGAAGGAAGTGGACGAGATGTGAATCCTAGTTCTCGTTCTTTATCGGATAAGATGGTGGAGGAAATTGATGAAGGAGTTACCTGTGATCAAAGGGAGAACATACACGATCCAGCATCGGAACAAGAAGGAAAAGAATCGAATGCACGAGGCTCAAATGCTAGTGTAACAGCCGCCGAAGACACAAACAAGAGTCTTGAAACTGATATCTTGCACTTCAAGTCATATTCAGAAACCGATTCCAATTTCAAATATGTGAAAGATATTCTTGAATATTCGGGTTTCACGAGAAATGAGCAGGCTCAAATGCGATACACGGTAGACCAGCCAATAAAACCATCGTTATTCACAGCTTTGGAAGAATCTTTGCTTCATGAAAATGAGTATTCCGGTGACGAGATTACCAACATATGTGATCGCCAACTTCTATTTAACTTGATTAACGAGGTACTCTTTCAAATGTACGAAAAGTCACCAACTTACTTTCCGAAACCCTTCGCCTTCAACTACAAACTCAAATCAATGCCTAAAGGGAACTATCTTGTTAATGAAGTATGGAACAATGTTAGTTCATATTTGAGTTTGAGACCAGAGTTAGATGAGACATTAGATGATGTTGTCGGTCGTGATTTGACAAAGGGAACTGGTTGGATGAATCTTCAACAGGAAGAGGAATGTGTAGCACTTGAACTGGAGGACATGATCATAGATGATTTATTAGATGAAATTATCTTCTCTTGA 2067 0.3701 MGKQLINSEESTQIQEVNQGCMWGMFNILDYHHWGVKKVFHHKKKRHNRYKRKITLQEQHNVVTEAESHLVSQHREISSAKGQTSSENALHQKKDGNTTESSLKRDISIKFKNNDDVLELISVEKNLLLKFLKDIDFGGKKYHKASHNKATLTKSGSFPLPASSKTKNISSSTFRAKQTEIWDFPKGEKLRVGTHVPKKFGSSSVKDISYETLKPSATDNGIDSVVAVEQKSSISTWSSDGLNHKGWNQVVTHQFKVIKQKIKHAIVELKKSGHSKTSPEYSNIDNEKEISQSLDDGAIHEYKKSRSLSETKASESGSNKHKPHLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSKHARIFSRSNLSMPNLEALGFILHEALLETNDIGNNIVESDNDVQSKSVSLSLKNDKSTDHFKEAEIDETVEGSGRDVNPSSRSLSDKMVEEIDEGVTCDQRENIHDPASEQEGKESNARGSNASVTAAEDTNKSLETDILHFKSYSETDSNFKYVKDILEYSGFTRNEQAQMRYTVDQPIKPSLFTALEESLLHENEYSGDEITNICDRQLLFNLINEVLFQMYEKSPTYFPKPFAFNYKLKSMPKGNYLVNEVWNNVSSYLSLRPELDETLDDVVGRDLTKGTGWMNLQQEEECVALELEDMIIDDLLDEIIFS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4483 688 MobiDBLite consensus disorder prediction 434 503 - -
Tpr7g4483 688 Pfam Domain of unknown function (DUF4378) 525 684 IPR025486 -
Tpr7g4483 688 PANTHER PROTEIN TRM32 86 688 - -
Tpr7g4483 688 PANTHER PROTEIN TRM32 1 86 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 303 329 - -
Tpr7g4483 688 PANTHER PROTEIN TRM32 86 688 IPR044257 -
Tpr7g4483 688 PANTHER PROTEIN TRM32 1 86 IPR044257 -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 270 289 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 459 486 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 303 322 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 75 92 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 487 503 - -
Tpr7g4483 688 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4483 Tpr-Chr7 53535117 53539280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4483 116 678 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 30.637 1.22e-49 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4483 - - mtr:MTR_2g096870 946.806