Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4482 ATGAAGCTTTTGAACAACCCTTTTCCCTTTTCTTCTCAATCTCATATTCATTCACCCATCATGGAACAATCTTCTCCTGTTACTAACCCTAATCAAATTCATCTTGCTGTTGGTAAATCCCTTCACAAAACCACTACCTTACTTCAATGGACTTTCAATCAATTTAGGAACCAAGAAATTGTCTTGATTCATCTTTATCAACCTTCTCCTGTTATACCCACTTTATTGGGGAAAATGCCAGCTTCCCAAGCTAATCCTGAAGTGGTATCTGCTTTTAGAAGAGAGGAAAGAGAACAGACTGTGAGGTTTACTGATAAGTATTTGAGCATTTGCTATGCAGCTAAGGTGAAGGCGAGCGTTATTGTAGCGGAAACTGGCCAAATCCAAAAAGGAATTGTTGATTTGGTTGTTAGTCATAATATTAGGAAGCTTGTCATTGGAGCGGAAACGGAAAATTTCATGAAAGTGAAAAGGAGTTCTGGGAAAGCAAATTACACTTTCAAACATGCTCCCCCGTTCTGTGAAATATGGTTTATATATAAAGGCAGACACATTTGGACAAGAGAGGCTTCTGAAACACTGTGTTCTTTGTCTTCACCTGCTCAAGCAGAGATTGCAACCACAGAAAGCTTGAGATGTAGTATGTTCAACCATTTGGAAGATCTTCAACCAAATTCTGCTAGAACTGCAGTATGTTCTGAAATTAGAAGCTTGGATCTCGGTGAAATCATAGAAACCGAAGCCACTAATTCATCCAAATCATCCAGTTGCAGCAGTTATTGTTCTCCACAAAATTCGACTGCGGTTTATCTAGATGCATATTCAGAGGTCATGGAAGAAAGAATTAACAGTCAACTTATTGAAACCCAAAGAGAAGCTGAGGCAGCAACAGATGAATCATTTGCAGAACTAATAAAGTGCAGGAGGTCGGAAGCTGAAGCCGCGGAAGCCATGCAGAAAGTCAAATTGTTTGAATCTGCCCATGCGCATGAGGTGGAGCTCAGGAAAGAGGCTGAGGTTGCACTTAGAGATACCGTACTAGAACAACAAAAGCTCTTAGAAGAGAGTGAACGTATCTCGGGAGAGCTACAAATGACCATGAGAAATGTGGCCCTACTAGATAGCCGTGCTAAGGAAACAATCCGTAGGCGAGATGAAGCTGCACACGAGCTCTTGCTAATTCAAACATCCATATCAACCTTGTGGCAAGAAAGGCAGCAGATCAGGAGACAGAAAATGGAAGCCCTCCGCTGGCTTGAACGGTGGAAAAGTCGTGGACAAATCGGAGCAGCTCATTACAATGGAGTCATTGGGTTCGCTGAAGAACTGCCTGAGTTAGCAGAATTCTCTTTATCGGATATTGAAAATGCTACATGTAATTTTTCCGAGAGCTTTAAAATCGCACAAGGTGGATTTGGTTGTATATATAAGGGGGAGATGTTAGGTAGAACTGTTGCTATAAAGAAGTTCCATCAACAAAATGTGCAAGGACCAGCAGAGTTTCATCGAGAGGTTCAAATTCTTAGTAGTCTCCAACATCCTCATTTATTGACATTGCTTGGTGTTTGCCCTGAGGCCTGGTCAATTGTATATGAGTACCTCCCGAATGGAACTCTTCAAAACTACCTATTCCGAAAAAGTAACATTATCCCTTTGACATGGAATATCAGAACACGAATGATTGCCGAAATTTCCAGTGCACTTTGTTTCTTACATTCTTTTAAACCAGAAGCTATTATTCATGGTGATCTTAAGCCTGAGACTATACTTCTCGATTCTTCACTTAGTTGCAAGATATGCGAATTCAGGTTCAGTAGGCTTGGGACGGAGGAGTCTCTCTATAGTCCTAGTAGTAGTTTCCGCTTGAGCACTGAGCCAAAGGGTGCTTTCACATATACGGATCCTGAGTTTCAGCGAACTGGAGTACTAACAACCAAGTCTGACATCTACTCCTTTGGTCTTATTATTTTGCAACTCCTCACTGGTAGGACTCCAGTTGGATTAGCAGTTCTAGTTCGCCATGCAGTTTCATTTGGAAAATTGTCATCAATTCTTGATTCTTCAGCTGGAGAATGGCCTTTATCTGTAGCAGCACGGTTGGTTGAACTGGGTTTGCAATGTTGCGCGCAAAATCGTAGAAGCAGACCAGAGTTAACACCTACTCTCGTGAGAGAATTGGAACAGTTACATGTTTCAGAAGAGAGACCTGTGCCATCTTTTTTCTTATGTCCAATCCTTCAGGAAATAATGCACGATCCTCAAATCGCAGCGGATGGATTTACATATGAAGGAGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACGTCTCCGATGACTAATTTAAAATTGAATCACTTGCTTCTCACTCCCAATCACTCAATTAGACTTGCCATCCAAGATTGGCTTTGCAAATCATAA 2424 0.4138 MKLLNNPFPFSSQSHIHSPIMEQSSPVTNPNQIHLAVGKSLHKTTTLLQWTFNQFRNQEIVLIHLYQPSPVIPTLLGKMPASQANPEVVSAFRREEREQTVRFTDKYLSICYAAKVKASVIVAETGQIQKGIVDLVVSHNIRKLVIGAETENFMKVKRSSGKANYTFKHAPPFCEIWFIYKGRHIWTREASETLCSLSSPAQAEIATTESLRCSMFNHLEDLQPNSARTAVCSEIRSLDLGEIIETEATNSSKSSSCSSYCSPQNSTAVYLDAYSEVMEERINSQLIETQREAEAATDESFAELIKCRRSEAEAAEAMQKVKLFESAHAHEVELRKEAEVALRDTVLEQQKLLEESERISGELQMTMRNVALLDSRAKETIRRRDEAAHELLLIQTSISTLWQERQQIRRQKMEALRWLERWKSRGQIGAAHYNGVIGFAEELPELAEFSLSDIENATCNFSESFKIAQGGFGCIYKGEMLGRTVAIKKFHQQNVQGPAEFHREVQILSSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQNYLFRKSNIIPLTWNIRTRMIAEISSALCFLHSFKPEAIIHGDLKPETILLDSSLSCKICEFRFSRLGTEESLYSPSSSFRLSTEPKGAFTYTDPEFQRTGVLTTKSDIYSFGLIILQLLTGRTPVGLAVLVRHAVSFGKLSSILDSSAGEWPLSVAARLVELGLQCCAQNRRSRPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQIAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLLLTPNHSIRLAIQDWLCKS* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4482 807 CDD STK_N 33 182 - -
Tpr7g4482 807 PANTHER OS02G0152300 PROTEIN 23 806 - -
Tpr7g4482 807 SUPERFAMILY RING/U-box 734 806 - -
Tpr7g4482 807 SMART Ubox_2 740 803 IPR003613 GO:0004842|GO:0016567
Tpr7g4482 807 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 54 154 - -
Tpr7g4482 807 SUPERFAMILY Protein kinase-like (PK-like) 445 723 IPR011009 -
Tpr7g4482 807 Coils Coil 279 299 - -
Tpr7g4482 807 ProSiteProfiles Protein kinase domain profile. 461 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4482 807 Gene3D HUPs 27 161 IPR014729 -
Tpr7g4482 807 CDD RING-Ubox_WDSUB1_like 741 782 - -
Tpr7g4482 807 Gene3D Phosphorylase Kinase; domain 1 438 533 - -
Tpr7g4482 807 PANTHER OS10G0100500 PROTEIN 23 806 - -
Tpr7g4482 807 Pfam U-box domain 737 806 IPR003613 GO:0004842|GO:0016567
Tpr7g4482 807 Pfam Protein tyrosine and serine/threonine kinase 466 719 IPR001245 GO:0004672|GO:0006468
Tpr7g4482 807 Gene3D Transferase(Phosphotransferase) domain 1 534 736 - -
Tpr7g4482 807 ProSiteProfiles U-box domain profile. 736 807 IPR003613 GO:0004842|GO:0016567
Tpr7g4482 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 807 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4482 Tpr-Chr7 53527002 53531386 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4482 20 804 U-box Gene Family AT2G45910 35.907 7.13e-166 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr7g4482 PK_Tyr_Ser-Thr 7.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4482 - - gmx:100788846 1209.13