Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4446 ATGTCAAAACCTAGAAACTTCTTTTTCTTCAAACCATCACCACCACCCCAATCATCATCACCATTTCCACCTTCCTCACCTCCCAACAAAACCTTCTCCGACGCAATCATCGACGAAAACATCGAAACCGCGCACACTCTCATAACAAAATGGAACTCTATTTCCACAACTTCAAACCATTCTCAATATCCCTATCTTTTCACCAACACTGAAGAATCCAAACACTATCTTAAAGCCGTTAAGAGTCTACAATCTGCTATGCAGTACCTCGTTGCAAAGGATTCCACCTCCAAGAAACTCATTGAAGCACAATCGTTAATGCAACTCGCCATGAAGAATCTTGAATCAGAATTTTATCGAATTTTAGGAGAAAACAGAGACCGGTTCAACTCTGAATCGGTCTCTGTTCTCTCTAGCTCCTCCACTGATCGTCGGAGTAGTTTCTCCGACGATGAATACTCTGACGAAGAATCGTCATCGCTCTCTGCTCAATCGGTATCTATGACTGCTGTACCTGATTTAAAAGCGATTGCAGAATGCATGATTTTCACCGGTTATAGCAAAGAGTGTGCTAAGATTTATGTAATTGTGAGAAAATCGATTGTGGATGAAGCACTTTACAATCTCGGTGTTGAGAAACTGAGTTTCTCTCAGGTTCAGAAAATGGATTGGGAAGTTCTTGAATGGAAGATTAAGACCTGGCTGAACGCCGTTAAAGTCGCTGTCAATACTCTGTTTCACGGCGAGAGAACACTCTGCGATTACATTTTTGAATCACGGGAGAAGAAAATTGCCGATTCATGTTTCAGCGAGATTTGCAAAGACGGTGCTATGATGCTGTTTTCTTTCCCAGAAAACGTCGCAAAATGCAAGAAAACGCCGGAGAAAATGTTCAGAACGTTGGATTTATACGAAGCGATTTCCGAAAATTGGCATCAAATTGAATCGATCTTTTCATCGGAATCAAATTACACGATCCGTTCTCAGGTGATTGCATCACAAGTGAGACTCGGTGAGACCGTTATAAATATGCTAACCGATTTCGAATCGGCGATTCAGAAAGAATCTTCGAAGGTTCCGGTACCAGGCGGAGGAGTTCATCCTCTAACACGCTACGTCATGAATTACATTGCACTTCTCTCCGATTACAGCGATGCAATCGCCGATATAGTTTCCGATTGGCCACAATCACCGTTACCGGAATCTTACTACAAAAATCCATCTCACGACGAGAATAATCCACCGTCGGAGATAGCAAAACGGTTATCGTGGCTAATTCTCGTTGTTCTTTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTTGCACTTTCGTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAAGTGCGTAAATCGAATCTAGGGTTTATTCTTGGTGAGGATTGGTTACTGAAACACGAAATGAAGGTGAAAGAGTATGTTACGAAATACGAACGCATGGCGTGGAGTAAGGTACTGTCGTCGATTCCGGAGAATCCAACGGCGGAGAATGCGAGTGGAATCTTCCAGAATTTCAACGTGGTGTTTGAAGAAGCGTTTAGAGCACAGTATTTGTGGGTTGTACCCGACCCGAAAATGCGAGAGGAAATTGGAGCGTGGTTAGATTTGAATGTTGTTTACAAGTACAGGGAGTTCTATGTGAAATATCGGGTCGGGTTGAATTCGGTTATAAGATATTCGCCCGAAGATTTGAGGAATTATCTGTCGGAGATTTTGTGTGGTAGCGTTTCGTCGCATTCGCCGGATCGGTGA 1788 0.4267 MSKPRNFFFFKPSPPPQSSSPFPPSSPPNKTFSDAIIDENIETAHTLITKWNSISTTSNHSQYPYLFTNTEESKHYLKAVKSLQSAMQYLVAKDSTSKKLIEAQSLMQLAMKNLESEFYRILGENRDRFNSESVSVLSSSSTDRRSSFSDDEYSDEESSSLSAQSVSMTAVPDLKAIAECMIFTGYSKECAKIYVIVRKSIVDEALYNLGVEKLSFSQVQKMDWEVLEWKIKTWLNAVKVAVNTLFHGERTLCDYIFESREKKIADSCFSEICKDGAMMLFSFPENVAKCKKTPEKMFRTLDLYEAISENWHQIESIFSSESNYTIRSQVIASQVRLGETVINMLTDFESAIQKESSKVPVPGGGVHPLTRYVMNYIALLSDYSDAIADIVSDWPQSPLPESYYKNPSHDENNPPSEIAKRLSWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFILGEDWLLKHEMKVKEYVTKYERMAWSKVLSSIPENPTAENASGIFQNFNVVFEEAFRAQYLWVVPDPKMREEIGAWLDLNVVYKYREFYVKYRVGLNSVIRYSPEDLRNYLSEILCGSVSSHSPDR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4446 595 MobiDBLite consensus disorder prediction 9 28 - -
Tpr7g4446 595 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 588 - -
Tpr7g4446 595 Gene3D Exocyst complex component Exo70 57 592 - -
Tpr7g4446 595 Pfam Exo70 exocyst complex subunit 233 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr7g4446 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 588 IPR004140 GO:0000145|GO:0006887
Tpr7g4446 595 SUPERFAMILY Cullin repeat-like 62 583 IPR016159 -
Tpr7g4446 595 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4446 Tpr-Chr7 53270882 53273523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4446 9 587 EXO70 exocyst subunit family AT5G59730 49.016 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4446 K07195 - gmx:100801773 713.375