Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4438 ATGAATGCACACTCAAATTCCAACAATATTATTCCATTCTCAACACCCTTTCTTCTTCCCTCTCAAGACCACTCTGTCCTCGAGTTCGACTCGCTCCACGACACTCTATCTCAACTCAACAACTCGGATTTGAGCAGTGGTTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCTATCAGCTTGATGCAGAGGAGTATTAGTAGTCATTCCCTTCACCACAATAATGGGACTCGCCATCATCCCTTTTCTGCTTTTTTTGCTGAATTGCTCGAATCGGACAATACTCCGGTGAGGAAAGTTTGCAGTACCGGCGACCTGCAGAGGATTAATGGAATGCAACATAATCATCATCATGTGGATAGTCCACTATCTAGTGAAAGTAGTATGATCATAGAAGGTATGAGCAGAGTTTGTCCATATAGCCCAGAAGAGAAGAAAGCCAGAATTGAAAGATACAAAACAAAGAGAAATCAGAGGAACTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGGAGGCCACGAATCAGAGGACGGTTTGCAAGGAATGATGAAATTGATAAGACCGCGAAAGTTGAGTGGAGCCACATTGGTGGTGGAGAGGAAGAGGATCAAGAAGATGAGAATTGGATCAATATCTTTGATTCCATAGTTGCTGCAAATCTTGATCATGATGAGTTTGAAGGCAGTTCCTCCTTTGGTCTATTGTATTAG 732 0.4235 MNAHSNSNNIIPFSTPFLLPSQDHSVLEFDSLHDTLSQLNNSDLSSGYSSYGGSPSPSTPISLMQRSISSHSLHHNNGTRHHPFSAFFAELLESDNTPVRKVCSTGDLQRINGMQHNHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKARIERYKTKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDKTAKVEWSHIGGGEEEDQEDENWINIFDSIVAANLDHDEFEGSSSFGLLY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4438 243 ProSiteProfiles CCT domain profile. 147 189 IPR010402 GO:0005515
Tpr7g4438 243 Pfam CCT motif 148 189 IPR010402 GO:0005515
Tpr7g4438 243 PANTHER CCT MOTIF PROTEIN 23 243 - -
Tpr7g4438 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 23 243 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4438 Tpr-Chr7 53193547 53196220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4438 143 203 C2C2-CO-like Transcription Factor Family AT5G15850 42.623 2.37e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g4438 CCT 6.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4438 - - gmx:100820236 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4438 7 53193547 53196220 Tpr4g1772 4 18415395 18419183 PCT