Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4433 ATGAATCTTCTCAAGAAATCTCCATCATCATCTTCATCAACATCATCATCAACAACAACAACAACTAGACCATCCTTTCCGAGGGATCCTCGCGGATCCCTCGAAGTATTCAATCCAACAAGCAACTCAAACTCACCAGTACGTTCTCCGTCCAACCTCAAAACTTGGACAGAAACCGAAGAACCACCAATAAGCGAATTCTCCGATGAAGTCACCATCACCAATACTTCATGGATGGCAATCAAGGAAGAAGAAAGTACCGGCAACGCCGCGCAGAGAGCAGCAGAGTGGGGGTTGGTACTAACAACAGATGCTGAGACTGGGAAACCACAAGGAGTGGCAGTTCGAAACTCCGGCGATGATGAACCTGGTGGAAAATTTGCTTCTAAAAGAAACTCCGGTAGAGCTTCCGGTGACTCTTCCGACGGTGGTGATGCACGTGGAGGGATACCGAGAGTTTCGGAGGATTTGAAAGATGCTTTATCGGCTTTTCAACAAACTTTTGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCAAGTGCGGGTTTTTTCAAAATGACGGGTTATACTTCAAAAGAAGTCATAGGAAGAAACTGTCGGTTTTTACAGGGTGCAGATACAGATCCGAATGACGTGGCAAAAATAAGGGAAGCATTGGAAACTGGGAAAAGCTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGAACTGCCTTTTGGAACCTTCTTACTATTTCACCCATCAAGGACAATGATGGCAATGTGCTCAAGTTAATTGGAATGTTGGTGGAGGTAAACAAACATACAGAGGGGTCCAAAGAGAAGAAGCTACGTCCAAATGGGTTGCCTGAATCCTTGATTCGATATGATGCTCGCCAGAAAGAGAAAGCTACATCTTCTGTATCTGAGTTACTACAGGCCATGAAACGTCCTCGTGCATTAAGTGAATCCGGACACCGTCCTTTTATCAGAAAATCAGGAGGAGGTTCTGAAGAAGACGAAGAAGTAGATAAAGCAGAACACAAATCAAGGAGAAATTCTGATAGTGTAGCTTCTTTTAGACTAAAATCACAAAGAAAAAGTAGAAGTTCAATGGAACGAATCAGTGAGCTACCTGAAAATCAACACAAAAACTCTCATCACCGTTCTTTCATGGGGTTCACGAGGAAAAGTCAGTCTATCGATGAAAACATCGATAGTAAAGAAATTGTATATGAAAGCTCTGAGAGTGATGATGATGAGAGGTCTGATAGTTTTGAATTTGATGACAAAGAAAAGCTGAGGGAAAAGCGAAAAGGTCTTGATCTTGCTACTACACTTGAGCGTATTGAGAAAAACTTTGTCATTACCGATCCAAGGCTTCCCGACAATCCCATAATCTTTGCATCTGATAGCTTCTTAGAACTTACGGAATATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCAGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAAGCAATTGACAACCAAACAGAAGTTACTGTGCAACTGATCAATTACACAAGGACTGGGAAAAAATTCTGGAACTTGTTTCATTTGCAACCTATGCGTGATCATAAGGGAGAAGTGCAATATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCATAACTGCATTAAAGAAGATACTGCAAAGGAGGGAGAAGAATTGGTAAAAAAAACTGCAGAAAATGTTGGTGAGGCAGTGAGAGAACTTCCAGATGCTAATCAGAAACCAGATGATTTATGGATGAATCATTCAAAAGTGGTTCACCCTAAACCTCATAGGAAGGACGATGTTCCTTGGAAAGCAATCCAAAAGATTACAGAAAGTGGCGAACAGATAAGCCTAAAGCACTTTAGGCCGATTAAACCTTTGGGATCTGGAGACACCGGAAGCGTGCATCTGGTGGAGCTTGAGGGAACTGGTCAGTACTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGCAATAAGGTGCATAGAGCTTGCACTGAGAGAGAAATTCTTGACATGTTGGACCACCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACGAAAACACATGTTTGTTTGATAACCGATTACTATCCTGGTGGAGAACTATTCCTGCTTCTTGACCAACAACCAACAAAGGTTCTCAAGGAAGATGCTGTCAGATTTTATGCTGCTGAGGTACTAATTGCATTGGAGTACCTTCATTGTCAAGGCATAATTTATCGGGATTTGAAGCCAGAAAACGTGTTGATCCAAAGCAACGGCCATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGGTATCTTGGGCAATAATTTCAAATAATGACATTATGTTAAAATCAATGTTGTCACTGAACAGTTTCACTTTGCAGCTTATTCTTCCAACTACAGAGGAAAAGAAGAAGAGGAAGAAAAAGAAGAAGAATGGACAACAAAAAAGTCCACAGGTTCCTATGTTTATGGCCGAACCAATGAGAGCGTCTAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCTGTAGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTTTATGGATATACACCATTTAGAGGAAAGACAAGACAAAAGACATTTGCAAATATTCTTCATAAAGATCTTAAATTTCCCAAAAGCAAACCGGTAAGTCCCCAGGCAAGGCAACTAATTTACCAGTTGTTGCATAGAGATCCCAAAAATAGATTGGGTTCACTTGAAGGAGCAAATGAAATTAAGAGTCATCCATTCTTCAAGAATGTCAATTGGGCTCTAATTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTATCTTACTGGAAAATGATGAAAATAGAGAAGCCAGAAATATTGACCCCGGCCTAGATGATTTACAAAAAAATATTTTCTGA 3009 0.4081 MNLLKKSPSSSSSTSSSTTTTTRPSFPRDPRGSLEVFNPTSNSNSPVRSPSNLKTWTETEEPPISEFSDEVTITNTSWMAIKEEESTGNAAQRAAEWGLVLTTDAETGKPQGVAVRNSGDDEPGGKFASKRNSGRASGDSSDGGDARGGIPRVSEDLKDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPNDVAKIREALETGKSYCGRLLNYKKDGTAFWNLLTISPIKDNDGNVLKLIGMLVEVNKHTEGSKEKKLRPNGLPESLIRYDARQKEKATSSVSELLQAMKRPRALSESGHRPFIRKSGGGSEEDEEVDKAEHKSRRNSDSVASFRLKSQRKSRSSMERISELPENQHKNSHHRSFMGFTRKSQSIDENIDSKEIVYESSESDDDERSDSFEFDDKEKLREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTRTGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIKEDTAKEGEELVKKTAENVGEAVRELPDANQKPDDLWMNHSKVVHPKPHRKDDVPWKAIQKITESGEQISLKHFRPIKPLGSGDTGSVHLVELEGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDQQPTKVLKEDAVRFYAAEVLIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQVSWAIISNNDIMLKSMLSLNSFTLQLILPTTEEKKKRKKKKKNGQQKSPQVPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSPQARQLIYQLLHRDPKNRLGSLEGANEIKSHPFFKNVNWALIRCMKPPELDAPILLENDENREARNIDPGLDDLQKNIF* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 104 147 - -
Tpr7g4433 1002 SUPERFAMILY Protein kinase-like (PK-like) 615 975 IPR011009 -
Tpr7g4433 1002 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 266 IPR035965 -
Tpr7g4433 1002 Gene3D PAS domain 167 322 - -
Tpr7g4433 1002 PANTHER FLIPPASE KINASE 1-RELATED 113 1002 - -
Tpr7g4433 1002 SUPERFAMILY PYP-like sensor domain (PAS domain) 452 551 IPR035965 -
Tpr7g4433 1002 CDD PAS 180 269 IPR000014 -
Tpr7g4433 1002 Pfam PAS domain 174 269 IPR000014 -
Tpr7g4433 1002 Pfam PAS domain 459 551 IPR000014 -
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g4433 1002 ProSitePatterns Protein kinases ATP-binding region signature. 643 666 IPR017441 GO:0005524
Tpr7g4433 1002 ProSiteProfiles PAC domain profile. 510 564 IPR000700 -
Tpr7g4433 1002 SMART serkin_6 637 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 35 70 - -
Tpr7g4433 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 1 70 - -
Tpr7g4433 1002 Gene3D Transferase(Phosphotransferase) domain 1 852 970 - -
Tpr7g4433 1002 Gene3D Phosphorylase Kinase; domain 1 635 716 - -
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 363 384 - -
Tpr7g4433 1002 SMART pas_2 438 507 IPR000014 -
Tpr7g4433 1002 SMART pas_2 155 224 IPR000014 -
Tpr7g4433 1002 CDD STKc_phototropin_like 635 976 - -
Tpr7g4433 1002 SMART pac_2 230 272 IPR001610 -
Tpr7g4433 1002 SMART pac_2 513 555 IPR001610 -
Tpr7g4433 1002 ProSiteProfiles PAS repeat profile. 436 509 IPR000014 -
Tpr7g4433 1002 Gene3D PAS domain 425 589 - -
Tpr7g4433 1002 Gene3D Transferase(Phosphotransferase) domain 1 717 786 - -
Tpr7g4433 1002 Pfam Protein kinase domain 854 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4433 1002 Pfam Protein kinase domain 639 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4433 1002 PANTHER PHOTOTROPIN-1 113 1002 - -
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 313 395 - -
Tpr7g4433 1002 TIGRFAM sensory_box: PAS domain S-box protein 461 551 IPR000014 -
Tpr7g4433 1002 TIGRFAM sensory_box: PAS domain S-box protein 180 273 IPR000014 -
Tpr7g4433 1002 ProSiteProfiles PAC domain profile. 227 281 IPR000700 -
Tpr7g4433 1002 ProSiteProfiles Protein kinase domain profile. 637 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4433 1002 MobiDBLite consensus disorder prediction 317 353 - -
Tpr7g4433 1002 ProSiteProfiles PAS repeat profile. 153 224 IPR000014 -
Tpr7g4433 1002 CDD PAS 451 551 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4433 Tpr-Chr7 53124605 53137404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4433 8 1002 AGC Kinase Gene Family AT3G45780 66.090 0.0 1317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g4433 Pkinase 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4433 K20715 - gmx:100817565 1474.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4433 7 53124605 53137404 Tpr4g1767 4 18337150 18348922 PCT