Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4430 ATGAGTTGTTTTCGTTGTGTAGGAAAATCACGCGAAAAGATCGAAAACAAGAACAATTCTAGCTATATAGAGAAGAAGCAGAGTACTATCAGTTCAGCTGATAAGGTCAAAATTGATATGCATTTGAATTTGAGTGTGAATGATAAAAGTGAAGATGATTCGAAACACGATCAACTTTCGTTGGACGTGAAGAATTTGAATTTGAATGACGAGGTTTCAACTGATGGAAAAGTTGCAAAGACATTTACTTTTGATGAGCTTGCAGCTGCAACAGGAAATTTTAGGGTTGATACCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGATACATTGAGAAAATTAATCAGGTTGTTGCAATAAAGCAACTTGACCCGAACGGGCTTCAAGGAATAAGGGAATTCGTTGTTGAAGTGTTAACACTTAGTTTGGCAGACCACGAGAACCTTGTCAAGTTATTAGGGTTTTGTGCCGAGGGAGAGCAGAGGCTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAATCATTTGCATGACCTTTCGCCCAGGAAAAAACGACTGGATTGGAATACAAGAATGAAAATAGCTGCTGGTGCAGCTAGAGGTTTGGAGTATTTGCATACCAAAATGAAGCCACCTGTCATATACCGCGACCTCAAATGCTCCAACATTTTGTTAGGCGATGATTATCATCCCAAGTTATCTGATTTTGGCTTGGCGAAAGTAGGTCCAATTGGTGATAAGACTCATGTTTCGACAAGAGTTATGGGCACATATGGGTACTGTGCTCCAGATTACGCAATGACGGGTCAATTGACATTCAAGTCTGACATTTACAGCTTTGGTGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAGGCCATCGATCATAGGAAACCTCATAAAGAACAAAATCTTGTTGCATGGGCAAGGCCTTTATTCAGAGACCGAAGAAGATTCTCAGAGATGGTTGATCCATTGCTTGAAGGTCAATATCCAGTAAGAGGTTTGTACCAATCTCTTGCTATTGCTGCTATGTGTGTGCAAGAACAGCCTAATATGCGACCGGTTACATCTGATGTGGTCACGGCTCTAAATTACCTTGCTTCACAAAAATATGATCCTCAAATTCATCCGATACAAAGATCTAGAAAACGTTCATCTTCCCCAGGAAAGAGTGAAGGTCATAGACGTGTTACTAGTAATGACTCGGAGACGTCAGACAGATCGAAAGATTAG 1248 0.4079 MSCFRCVGKSREKIENKNNSSYIEKKQSTISSADKVKIDMHLNLSVNDKSEDDSKHDQLSLDVKNLNLNDEVSTDGKVAKTFTFDELAAATGNFRVDTFVGEGGFGKVYKGYIEKINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHENLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSPRKKRLDWNTRMKIAAGAARGLEYLHTKMKPPVIYRDLKCSNILLGDDYHPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHRKPHKEQNLVAWARPLFRDRRRFSEMVDPLLEGQYPVRGLYQSLAIAAMCVQEQPNMRPVTSDVVTALNYLASQKYDPQIHPIQRSRKRSSSPGKSEGHRRVTSNDSETSDRSKD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4430 415 Gene3D Transferase(Phosphotransferase) domain 1 171 389 - -
Tpr7g4430 415 Pfam Protein kinase domain 96 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4430 415 MobiDBLite consensus disorder prediction 379 415 - -
Tpr7g4430 415 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Tpr7g4430 415 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Tpr7g4430 415 PANTHER OS07G0668900 PROTEIN 1 399 - -
Tpr7g4430 415 SUPERFAMILY Protein kinase-like (PK-like) 80 390 IPR011009 -
Tpr7g4430 415 MobiDBLite consensus disorder prediction 390 415 - -
Tpr7g4430 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Tpr7g4430 415 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4430 415 CDD STKc_IRAK 100 369 - -
Tpr7g4430 415 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 399 - -
Tpr7g4430 415 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4430 Tpr-Chr7 53104297 53107349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4430 1 373 Glycoside Hydrolase AT3G07070 54.813 1.81e-147 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr7g4430 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4430 - - gmx:100794680 635.565