Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4418 ATGGCTAAGTTCATTGTGAGAAATAGTAACAAAAAGAAGAATGGAGGTAGCATTGTGAAACTCATTGAGAAACTACAAAAGAAAATCTTGCTAGGGAGAAATAAATCAACATCAACCTATGTGCCTGAGGATGTGAAAGAAGGACATTTTGCAGTGATAGCTGAGGATAGAAAAGAAGATCAAGAACCAAAGAGATTTGTGTTACCATTAAGTTGTTTAACAAATCCAACATTTGTTAGGTTATTGGAACAAGCAGAAGAAGAGTATGGTTTTGATCATGAAGGTGCACTAACTATTCCTTGTAAGCCTAGTGAACTTCACAAGATGTTGCAACAATGGCAACAAGAAGAATACAATTCCTCCAATAACTACATGTTTTTTCAAAACTATTGA 393 0.3461 MAKFIVRNSNKKKNGGSIVKLIEKLQKKILLGRNKSTSTYVPEDVKEGHFAVIAEDRKEDQEPKRFVLPLSCLTNPTFVRLLEQAEEEYGFDHEGALTIPCKPSELHKMLQQWQQEEYNSSNNYMFFQNY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4418 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 118 IPR003676 GO:0009733
Tpr7g4418 130 Pfam Auxin responsive protein 33 110 IPR003676 GO:0009733
Tpr7g4418 130 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 22 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4418 Tpr-Chr7 52972191 52972721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4418 42 102 Calmodulin-binding Proteins AT3G43120 50.820 1.39e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4418 - K14488 gmx:100794278 148.288