Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4411 ATGTGCAAATCCAAAATGGCCATTGACGCCTCCACCCCCAAAAAATCTAAATCTAAATCAAAATCAACACCACCATCTTCATCATCCACACCCACACGTGCAACCTCTCTCCCCAAAACAAAATCAAAAACAAAAACCTCTTCATTCTCCGATAACCCTTCAACTTCCTACGCATCCACCTCCGGTTCAACCGGTTTCCATCTCTCAACAGATACATCAATCTCAAGTAGAACATCTCTAACATCACTCCGTGGCACACTCCCAGAAAATCCCAACATCTACGACTTCTCCGAAATATGTTCCGCCACAAACAACTTTCTCTCAAAACGCTACTCATCTTCAACCCCTTGCTGGCACTGTACCCTCCGTGGCGCTGACGTCATCATTTTCCAACGCAAATTCCGACGCAAACTCCAAACCTCTCAGCTTCGTGAACTTCTCTCCGTAGTTTGTCGTAGTCACCACGTCAGCATAATCAAACTCCTCGGCGTTTCAATCTCCGGTGAACATATTTATCTCGTTTACGAATACGTTCACGGTGCTAATCTCTCTGATTGTTTACGAAATTCACGAAACGTTCATTTCACCGTTCTTTCTACATGGATTTCGAGAATGCAGGTTGCGACCGATCTCGCTCATGGACTCGATTACATTCATAATAAAACTGGTTTGAATTTCAATTTTGTTCATAATCATATCAAGAGTAGCGCGATCGTTGTTACAGAACCTGATTTCAATGCTAGGGTTTGTCATTTCGGTGCGGCGCAGCTTTGCGGTGAAGCTGTTGAGGAAAACGAAATTGCGACCAAACAATTGGGGGAAATCACGGAGGAAGGTAGATCAAAGGAATTGAGAAGCTCCGATGTGCAATTCGAAGGTGTTCGGGGGTATATGTCGCCGGAATTTCAATCCACCGGCGTAGCGACTCAGAAGTCTGATGTTTATGCTTTTGGAGTGGTGATGTTGGAGCTTTTGTCAGGAGAGGAACCGTTGAAGTTTAAATTTGATGAGAAGAGGCGTGATTTTGTGAGAATTTCGGTGATTGAATCGGCGAGAGCCGCCGTGGACGGCGGCGACGGCGATGGTAGTGTGGAAGGGAAGCTGAGGATGTGGGTTGATAGGAGATTGAAAGATTCTTTTCCGGTTGATGTTGCTGAGAAATTGACACGTGTAGCGTTGGATTGTGTACACGTGGATCCAGATAAGAGGCCTAATATGGGACGCGTTGCAGGGAAAATATCCACGCTGTATTTGAAGTCAAAGAATTGGTCTGACAACATGAAAATGCCTGATATGTCCTTTTCATTAGGTCCTCGTTGA 1320 0.4508 MCKSKMAIDASTPKKSKSKSKSTPPSSSSTPTRATSLPKTKSKTKTSSFSDNPSTSYASTSGSTGFHLSTDTSISSRTSLTSLRGTLPENPNIYDFSEICSATNNFLSKRYSSSTPCWHCTLRGADVIIFQRKFRRKLQTSQLRELLSVVCRSHHVSIIKLLGVSISGEHIYLVYEYVHGANLSDCLRNSRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGLNFNFVHNHIKSSAIVVTEPDFNARVCHFGAAQLCGEAVEENEIATKQLGEITEEGRSKELRSSDVQFEGVRGYMSPEFQSTGVATQKSDVYAFGVVMLELLSGEEPLKFKFDEKRRDFVRISVIESARAAVDGGDGDGSVEGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDKRPNMGRVAGKISTLYLKSKNWSDNMKMPDMSFSLGPR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4411 439 MobiDBLite consensus disorder prediction 17 62 - -
Tpr7g4411 439 MobiDBLite consensus disorder prediction 1 62 - -
Tpr7g4411 439 Gene3D Phosphorylase Kinase; domain 1 69 177 - -
Tpr7g4411 439 PANTHER OS09G0572100 PROTEIN 1 439 - -
Tpr7g4411 439 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 439 - -
Tpr7g4411 439 SUPERFAMILY Protein kinase-like (PK-like) 135 409 IPR011009 -
Tpr7g4411 439 Gene3D Transferase(Phosphotransferase) domain 1 179 433 - -
Tpr7g4411 439 ProSiteProfiles Protein kinase domain profile. 96 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4411 439 Pfam Protein kinase domain 136 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4411 Tpr-Chr7 52882750 52884362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4411 89 435 Receptor kinase-like Gene Family AT1G51940 30.899 1.50e-40 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr7g4411 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4411 - - gmx:100792694 597.43