Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4408 ATGGCCAAACCATACTCTTTGCTCTGTATTCTCTCTGCCTCACTCTATTATTACTTCTTCATTAGTTGCTTAGCTAAAAGTACTAAAAACATCACCACCGATGAATTTGCACTTCTTGCATTCAAATCATCTATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTCCTCTTCTTCTTTCTTCTCATCATGCAATTGGGTTGGTGTCACTTGTGATGAGCATCATGGAAGAGTAAAGGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACAATAATTTCTCCTCAAATGGGAAATCTCTCTTTTCTTGTTTTTCTTGATCTACAAGGCAATAGTTTCCATGGTGAGTTACCACAAGAATTACTTAAATTGCATAGATTGAAATGGTTGGATTTGAGCTACAATGATTTTGTTGGAGAATTTCCATCAAGGGTAGGGGACTTATCCAAACTTCAACACTTGGATCTTGGCTATAATAATTTTGTTGGAATAATTCCACAATCTATATCCAATTTATCAATGTTAGAGTATCTAAATTTGAACTCAAATCTCATTAAAGGAACCATTCCAAAGACAGTTTCCAACATGTCTTCCCTTGAAGAAATCTACTTAGCAAATAACTCCTTATCAGGAGAAATTCCGAAAGGAACCGGTGATCTTGCACGGCTGAGAATTGTGAACTTTCAAGATAATATGCTCTCAGGCAACATATTATTCATGTTCAACAACTCATTATTGCAATACTTAGCTCTTGGTGATAATCATTTGACCGGCATTCTTCCATCAAATGTTTGTCAAGGCCTTCCAAACCTTAGATTACTATATCTTTACTTTAATGATTTCTCTGGTGAGATGCCAAAAGTTTGGTCTCATTGCAAAGAATTACAATATTTGGAACTATCAGGCATTCATTTTGACAAAGGACGCATGCCATCTGACATCGCAAAATTGACCAAGCTTCAATATTTGTATCTTCCTTTAACCAACTTGCATGGTGAAATTCCATTTTCCCTCTTCAACATCTCTTCTTTGATAAAGATCATCCTTGACAAGAACAACTTAAATGGAAGTCTCCCACATGAGATGTGTCATCAATTTCCTCAGCTTCAAGTTTTTTCTCTAGACTATAATGATTATAGAGGAATCATTCCACGATCTATTAAAAATTGCACATCTTTACAATATTTCAGTTTGGCAGATAACTTTTTTACAGGTTCGATACCAATAGAGATTGGCCATCTGAATCAACTCAAACTTTTACAATTGGGAAATAACAGCTTGAGTGGACCTATTCCTTCAAAACTCCTCAACATTTCAACATTGAAAATTTTGAGTCTTGATCAAAATTATCTCTCAGGCATGCTTCCATCAAATATGGGATTTGGTCTTCCTAACCTACGACGCCTATCCATATATGAAAACAACTTTGTTGGAAAAATTCCTGATACTATATCCAATGCTTCAAATCTCGTTCAACTTGACATGAGTGAAAACGAATTTAGTGGAATTATACCCAATTCTTTTGGAGATTTAGCATTCCTCAAATACCTCGGCATAAGTAGGAATAATTTGACAATAATTGATGATGATTCTTTTGAAATAAACTTCCTTACTTCACTTACTAGTTGCACATATCTTGAACATCTTGAAGTATCAGAGAATAGGTTACTTTCAAAACTTCCCAAGTCGATTGGAAACTTATCATTACAATATTTTATGGCAGATTCTCTTGGAATTAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAGCCTCATTGAATTATCTCTGAGTAGGAATAATTTAACCGGACCGATTCCTAGTACAATTAAAAGGTTAAATCAACTTCAACATTTGAATCTTGGCTACAATGGACTGCAGGGATCAATAGTTCATGACCTTTGTGAAGTGAGCAGTTTGAGTGAGTTGTATTTAACAAGAAATAAGCTTTTTGGTGTGTTACCAACATGCTTGGGAAATATGACTTCTCTAAGAGAGTTTCATACAGGATCTAATAACTTGACTTCAAAGATACCTTTGTCTTTTTGGAATCTTGAAGATATTTTAGAGGTAAACTTATCCTCTAATGCTTTAATTGGAATTCTGCCACCTGAGATTAAGAATTTAAGAGCTGTTACACTATTAGATCTCTCTGAAAATCAATTTTCAAGCAATATTCCAACAGCCATAAGCTTATTGAGAACTTTAGAAACTCTATCTTTAGCAAATAACAAATTGAATGGTTCAATTCCAACATCACTTGGTGAAATGTTAAGTTTGAGTTTCTTGGACTTTTCTCAAAATCTTATAACTGGTGTAATTCCAAAATCATTAGAGTCACTTTCTTATCTTAAATACATAAATCTATCATACAATAGATTGCAAGGAGAGATTCCTGATGGAGGACCTTTCAAAAGCTTCACAGCTCAATCTTTCATGCATAATGATGCGCTTTGTGGCAGTCCTCGCTTAGAAGTACCTCCATGTGATAAACAAATTAGGAAAAAAGCAAAGACAAAGATGGTATTAATCATATGCATAACATCCACATTTGTTTTGTTAGGCATTTTGGTTGGTGCATGCATAATACTTCGGAGGCATAAAAGGAAAAAGGTTGAAAATCCACATAAAAGTGATTTGTCAGCTACTTTAGGGGCTCCAAGAAGAATATCCTACTATGAACTTGTCAAAGCGACTAATGGATTCAGTGAAAGTAATTTACTTGGAAGAGGTGGCTTTGGATCTGTGTATCAAGGAATTCTTTCTAGTGGAAAGATGGTGGCAATTAAAGTACTTGACTTAACATTGGAAGCAACATCAAGAAGCTTTGATGCAGAATGTAATGCAATGCGCAACCTTAGACATCGAAATCTGGTTCAGGTTATCGGTAGTTGTTCAAATGATGATTTCAAATCTCTAGTGATGGAGTTTATGTCAAACGGAAGTGTGGAAGCATGGTTATACTCAGAGAACTATTGTTTGAATTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCATTAGCATTGGAGTATCTGCATCATGGTTCTGCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTAGATGAAGATATGGTTGCGCATATTAGCGATTTTGGCATTTCCAAGCTTTTGGATGAAGGACAATCTAAAACTCATACCCAAACTTTAGCTACTCTTGGTTATGTTGCACCAGAATATGGATCTAAGGGAGTCATTTCAGTTAAAGGAGATGTGTACAGTTATGGGATAATGTTGATGGAAATGTTCACTGGAAAGAAACCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAATCAATGGTCAATTCAGTCATGGAAGTTGTGGATTACAATTTAGGCTCACAACATGGAAAAGAACTTCATGAAATTTTAGCTTTAGCTTTGAGTTGTTGTGCAGATTCACCTGAAGCAAGAATTAAAATGACAAATGTAACCGCATCGTTAATCAAAATCAAGACTTCAGTCATGCGGTGA 3543 0.3506 MAKPYSLLCILSASLYYYFFISCLAKSTKNITTDEFALLAFKSSITLDPYHMLSNWSISSSSFFSSCNWVGVTCDEHHGRVKALNLSNMGLEGTIISPQMGNLSFLVFLDLQGNSFHGELPQELLKLHRLKWLDLSYNDFVGEFPSRVGDLSKLQHLDLGYNNFVGIIPQSISNLSMLEYLNLNSNLIKGTIPKTVSNMSSLEEIYLANNSLSGEIPKGTGDLARLRIVNFQDNMLSGNILFMFNNSLLQYLALGDNHLTGILPSNVCQGLPNLRLLYLYFNDFSGEMPKVWSHCKELQYLELSGIHFDKGRMPSDIAKLTKLQYLYLPLTNLHGEIPFSLFNISSLIKIILDKNNLNGSLPHEMCHQFPQLQVFSLDYNDYRGIIPRSIKNCTSLQYFSLADNFFTGSIPIEIGHLNQLKLLQLGNNSLSGPIPSKLLNISTLKILSLDQNYLSGMLPSNMGFGLPNLRRLSIYENNFVGKIPDTISNASNLVQLDMSENEFSGIIPNSFGDLAFLKYLGISRNNLTIIDDDSFEINFLTSLTSCTYLEHLEVSENRLLSKLPKSIGNLSLQYFMADSLGINGNIPLEIGNMSSLIELSLSRNNLTGPIPSTIKRLNQLQHLNLGYNGLQGSIVHDLCEVSSLSELYLTRNKLFGVLPTCLGNMTSLREFHTGSNNLTSKIPLSFWNLEDILEVNLSSNALIGILPPEIKNLRAVTLLDLSENQFSSNIPTAISLLRTLETLSLANNKLNGSIPTSLGEMLSLSFLDFSQNLITGVIPKSLESLSYLKYINLSYNRLQGEIPDGGPFKSFTAQSFMHNDALCGSPRLEVPPCDKQIRKKAKTKMVLIICITSTFVLLGILVGACIILRRHKRKKVENPHKSDLSATLGAPRRISYYELVKATNGFSESNLLGRGGFGSVYQGILSSGKMVAIKVLDLTLEATSRSFDAECNAMRNLRHRNLVQVIGSCSNDDFKSLVMEFMSNGSVEAWLYSENYCLNFLQRLNIMIDVALALEYLHHGSAIPVVHCDLKPSNVLLDEDMVAHISDFGISKLLDEGQSKTHTQTLATLGYVAPEYGSKGVISVKGDVYSYGIMLMEMFTGKKPTNEMFSEELTLKTWISESMVNSVMEVVDYNLGSQHGKELHEILALALSCCADSPEARIKMTNVTASLIKIKTSVMR* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4408 1180 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 22 151 - -
Tpr7g4408 1180 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 150 267 - -
Tpr7g4408 1180 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 176 308 - -
Tpr7g4408 1180 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 271 411 - -
Tpr7g4408 1180 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 371 1178 - -
Tpr7g4408 1180 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Tpr7g4408 1180 SMART LRR_typ_2 199 223 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 514 537 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 466 490 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 103 127 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 641 664 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 271 294 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 491 513 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 665 688 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 151 174 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 737 761 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 593 617 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 713 736 IPR003591 -
Tpr7g4408 1180 SMART LRR_typ_2 175 198 IPR003591 -
Tpr7g4408 1180 Gene3D Phosphorylase Kinase; domain 1 867 981 - -
Tpr7g4408 1180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Tpr7g4408 1180 SUPERFAMILY RNI-like 247 562 - -
Tpr7g4408 1180 Pfam Leucine rich repeat 150 188 IPR001611 GO:0005515
Tpr7g4408 1180 Pfam Leucine rich repeat 467 527 IPR001611 GO:0005515
Tpr7g4408 1180 Pfam Leucine rich repeat 738 798 IPR001611 GO:0005515
Tpr7g4408 1180 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Tpr7g4408 1180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1025 1037 IPR008271 GO:0004672|GO:0006468
Tpr7g4408 1180 ProSiteProfiles Protein kinase domain profile. 906 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4408 1180 SMART serkin_6 906 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4408 1180 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 371 1178 - -
Tpr7g4408 1180 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 150 267 - -
Tpr7g4408 1180 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 271 411 - -
Tpr7g4408 1180 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 176 308 - -
Tpr7g4408 1180 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 151 - -
Tpr7g4408 1180 SUPERFAMILY L domain-like 33 306 - -
Tpr7g4408 1180 Gene3D Ribonuclease Inhibitor 193 244 IPR032675 -
Tpr7g4408 1180 Gene3D Ribonuclease Inhibitor 534 842 IPR032675 -
Tpr7g4408 1180 Gene3D Ribonuclease Inhibitor 245 533 IPR032675 -
Tpr7g4408 1180 ProSitePatterns Protein kinases ATP-binding region signature. 912 934 IPR017441 GO:0005524
Tpr7g4408 1180 SUPERFAMILY L domain-like 578 826 - -
Tpr7g4408 1180 Gene3D Transferase(Phosphotransferase) domain 1 982 1179 - -
Tpr7g4408 1180 SUPERFAMILY Protein kinase-like (PK-like) 884 1171 IPR011009 -
Tpr7g4408 1180 Pfam Protein kinase domain 907 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4408 Tpr-Chr7 52866219 52873137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4408 580 822 Receptor kinase-like Gene Family AT3G47570 34.286 3.45e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g4408 Pkinase 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4408 K13420 - mtr:MTR_6g040210 1248.42