Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4400 ATGAAGCACCAACTCAAAGTTTCTGTTGCTCTTGTTATTAGCTTGCTATGGTTTCAGCACTCACTTTGTGCAAATGAACCTTCTGATTCTGATCTAAACAAGTGGAAATGTAGATGTTCTTTCCGAGTTGACCAGAAAAACTCTATTTCTAATTGTTCGAAGTCATGTGATTGCCATTCAGAGACTGCATCCATATGGACATGCATATGTGATTCAAATGGCTTTCCTGAAGTGGCAGCAGGAAGCCATAATCCTAATTGCTTTATTGCCTGCAACTGCATCTGGGGAACTGCTAAGATGTCACTGGGTTCAAAGACACACATTTCGAGCAAGATTGTAATAACCATTATAGTAATGTGTGTTACATGCACAACTATTGCAGTTCTAGCCTCAGTTCTATGTTATGTCCGCCGAAGGAAGAGGCATCATCCTATTCAATCACCAATGATCTCGTCATCAGATAAGGAAACAAGTTATAGTGGTCCCAGCAACTTCATTAGTCAGAGGACTTCTTTTGTGCCAGATATAAAAGGCATTATTGATTCTCCTATAAGTCATATTACAAGATGCTTTCAAAATGCCTCTATCTTGTTTGGGAATCAAAGAGAAACATTTCATGGAAATATTATTCAGTTTTCATTTGCTGAACTGGAAAATGCCACTGAAAACTTTAAAGCTTCCAACCTTATTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGACTGGAAAATGGTAGTAATGTGGCAGTAAAGAGACTTAAAAATCAAGGAGGGCCTGAAGCCGACACTGAATTTTTTACAGAGATTGAACTATGGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAACCGTTCAGAGGTTACTAGTGTTTGATTACATGAGTAACGGAAATTTGAGGGACCGTTTAGATGGAATTTTCGGAAAAAATATGGATTGGTCTACTCGAGTTACAATTGCATTAGGAGCTGCAAGGGGTTTGGAGTATCTTCATGAAGCAGCTGCTCCTAGAATTCTCCACAGAGATGTCAAATCAACAAACATTCTTCTTGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTTTGGCTAAAGACTTAAGATCTGGTGACCTCACCAGTTGCTCAGATTCTTCTCAGAGAATGAAGGGGACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTATTGAGTCTGATGTCTTCAGTTTCGGCGTGGTTCTTCTCGAGCTTATCAGTGGTCGCCAACCAATCCTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTACTCCTCGGTTATATGACAGTAGGCGAGTAATTACAGAGTTGGCTGATCCAAAATTGAAAGGAAACTTCCCAGAAGATGAGGTGTATATAATGGCAAACCTAGCAAAGGAGTGCTTACTATTGGATCCTGATACTAGACCAACTATGAGTGAAGTTGTTCTAATTCTTTCAAGTATTTCCCGAACCAAATCTAGAAGGAGAAGATACATTCAATTGTGCCTTTTTCAGGTGAACACATTTGCCGAGGAACCAGATAATGCAGAGAAGCAAAGACAAGCTTCATGGAGAAGATTTCCACCTCCTAATTCATTACCACGAGGTACTGACTACAATCTCCGTGTTGAAAATGAAGATAAAGATGTAGATACAATTTCAACAGAGTATATGAAGAGTTTGATCCTCTTTACTTCAAAAGGTGAGAGCTGGCGTGCATTAGAAGAGGAAATGGTAGACCTATCGGAACCTCGGTTGGAATCGTTTTTCCCTTGA 1830 0.3967 MKHQLKVSVALVISLLWFQHSLCANEPSDSDLNKWKCRCSFRVDQKNSISNCSKSCDCHSETASIWTCICDSNGFPEVAAGSHNPNCFIACNCIWGTAKMSLGSKTHISSKIVITIIVMCVTCTTIAVLASVLCYVRRRKRHHPIQSPMISSSDKETSYSGPSNFISQRTSFVPDIKGIIDSPISHITRCFQNASILFGNQRETFHGNIIQFSFAELENATENFKASNLIGLGGSSYVYRGRLENGSNVAVKRLKNQGGPEADTEFFTEIELWSRLHHCHLVPLIGYCSELKGKTVQRLLVFDYMSNGNLRDRLDGIFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGLAKDLRSGDLTSCSDSSQRMKGTFGYFAPEYAIVGRASIESDVFSFGVVLLELISGRQPILKSAGKEESLVVWATPRLYDSRRVITELADPKLKGNFPEDEVYIMANLAKECLLLDPDTRPTMSEVVLILSSISRTKSRRRRYIQLCLFQVNTFAEEPDNAEKQRQASWRRFPPPNSLPRGTDYNLRVENEDKDVDTISTEYMKSLILFTSKGESWRALEEEMVDLSEPRLESFFP* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4400 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Tpr7g4400 609 Gene3D Phosphorylase Kinase; domain 1 196 304 - -
Tpr7g4400 609 ProSiteProfiles Protein kinase domain profile. 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4400 609 Gene3D Transferase(Phosphotransferase) domain 1 305 524 - -
Tpr7g4400 609 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 607 - -
Tpr7g4400 609 CDD STKc_IRAK 230 506 - -
Tpr7g4400 609 SMART serkin_6 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4400 609 Pfam Protein kinase domain 226 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4400 609 PANTHER OS01G0253100 PROTEIN 2 607 IPR045271 GO:0004714|GO:0006468
Tpr7g4400 609 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Tpr7g4400 609 SUPERFAMILY Protein kinase-like (PK-like) 205 503 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4400 Tpr-Chr7 52779539 52784686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4400 1 607 Receptor kinase-like Gene Family AT2G28250 48.287 1.62e-179 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Tpr7g4400 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4400 - - gmx:100499641 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4400 7 52779539 52784686 Tpr4g1667 4 17181288 17188500 PCT