Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4387 ATGGCTATGGCTGTTGCACAAAGGGATAACAGCATTGAGAGACACATTGATTCTTCTGGGAAATATGTGAGGTACACTGCTGAACAGATTGAAGCTTTGGAAAAGGTTTATGTGGAATGCCCCAAACCAAGTTCATTGAGAAGGCAACAGCTGATTCGAGAGAATCCGGTTTTATCCAACATCGAACCTAAACAAATCAAGGTTTGGTTTCAGAACAGAAGGTGTAGGGAGAAGCAGAGGAAAGAGTCTTCTGAGCTTCAGACTTTGAACAGGAGACTTGCAGCAATGAACAAGCTGTTGACAGAGGAAAATGATCGGCTGCAGAAACAGGTTTCACAACTGGTGAATGAGAATGGATTTATGCGCCAACAAGTTAACACCATCACAGCTGCTGCAAGTGCTGATGGCAGCGATTCCGCGGCTGCTACTCCTCCTCTGAGTTCCATGAGAGATGCTAATAGCCCTGCTGGATTCCTATCAATTGCAGAGGAGACATTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATATTTGCCATTTCTCAAGGTTGCAATGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTGCTAAGATTGTGGAGCTCCTAAAAGATCGCGCGTCTTGGTATCGTGACTGTCGGAGTTCAGAAGTTTTTACAATGTTCCCAGCTGGAAATGGAGGGACAATTGAACTTGTTTACACACAGACATATGCTCCAATGACGCTGGCTTCTGCTCGGGATTTCTGGACTCTAAGATACACTACAAACTTGGAAAATGGCAGTATTGTGGTTTGTGAAAGGTCACTGTCTGGTTCTGGTGCTGGGCCTAATGCTGCTGCTGCCGCACAATTTGAGAGGGCTGAAATGCTTCCCAGTGGCTATTTGATTCGACCATGTGAAGGTGGAGGGTCAATCATCCGCATTGTAGACCACCTAAATCTTCAGGCATGGAGTGTGCCAGAAGTGCTGCGACCACTCTACGAATCATCAACGATGGTTGCTCAGAGATTGACAATTGCAGCACTTCGCTATATCAGGCAAGTAGCTCAAGAAACAAGTGGCGAAGTGGTATATGGCATGGGTCGGCAACCTGCGGTTCTGAGAACTTTTAGCCAACGGTTGAGCAGAGGTTTCAATGATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTTTTGAACTGTGATGGTGCGGAGGGTGTTACTATTGCTGTTAATTCAATCAAGAATTTGAGTGGCACTGCTAATCCAGCAAGTTCCCTTTCACTCCTTGGAGGAATTGTCTGTGCAAAAGCTTCTATGTTACTCCAAAATATCACTCCTGCTGTTTTAGTTCGCTTTCTGAGGGAACATCGCTCAGAGTGGGCCGATTTTAGTGTTGACGCATTTTCTGCTGCATCGCTTAAAGCTGGCTCCTATGGCTATACTGGAATGAGGTCTACGAGGTTCACCGGCAACCAAGCAATCATGCTGCTTGGACATTCAATTGAACATGAAGAGATGCTAGAAGTTATCCGCCTTGAAGGTCACGCTCCTGCTCATGAAGATTCTTTTGTTTCTAGGGACGTTCATCTCTTACAGTTGTGTACTGGAATTGATGAGAATGCTGTGGGGGCTTGTTCTGAGCTCATATTTGCACCAATTGATGACATGTTCCCAGAAGATGCTCCATTGGTGCCTTCTGGTTTCCGCATTGCTCTGCTGAATTCACAACAGGGTGATAAACAGAACTCATTGACAGCAAATCGAGCCTTGGATTTGACTGTTGCTCCGACAACAACTCATGCCGCGGGAGACACATGTCCTAACAACCGATGTATTTTGACTGTTGCCTTCCAGTTTCCTTTTGAAACCGGTCTACAGGATAATGTTGCAGCTATGGCACGTCAGTATATCCGCCGTGTAGTTTCTGCTGTGCAGGCACTTGCCACTGCTATATCTCCATCCAGTGCTAACACCGCCGGTGAAGCAAAACTCTCCCCCGGCTCTCCTGAAGCCCTTACACTAGCTCAATGGATCTGCCAGAGTTATAGTAATTATTTGGAGGTGCCACTACTGAGATCCGATTCTCTTATCGGGGATATGGTACTGAAACATTTGTGGCATCATCCTGATGCTATTTTGTGCTGTTCTTTGAAGACGGTACCCGTCTTCATCTTTGCAAACCAGGCTGGCCTTGACATGCTGGAAACAACTCTTGTGGCTCTACAAGACATCACGCTGGATAAAATATTCAATGACTCTGCTCGCAAGAATTTGATTGCGTACTTTGCTAAGTTAATGCAGCAGGGGTTTGCTTGTATGCCAGCTGGGATCTGCATGTCAACAATGGGGAGGCACGCATCCTATGATCAAGCTGTCGCGTGGAAAGTGCATGCTGAAGATACCAGTGTTCATTGCCTTGCTTTTTCTTTCATAAATTGGTCATTTATATGA 2502 0.4628 MAMAVAQRDNSIERHIDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRENPVLSNIEPKQIKVWFQNRRCREKQRKESSELQTLNRRLAAMNKLLTEENDRLQKQVSQLVNENGFMRQQVNTITAAASADGSDSAAATPPLSSMRDANSPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQGCNGVAARACGLVSLEPAKIVELLKDRASWYRDCRSSEVFTMFPAGNGGTIELVYTQTYAPMTLASARDFWTLRYTTNLENGSIVVCERSLSGSGAGPNAAAAAQFERAEMLPSGYLIRPCEGGGSIIRIVDHLNLQAWSVPEVLRPLYESSTMVAQRLTIAALRYIRQVAQETSGEVVYGMGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEGVTIAVNSIKNLSGTANPASSLSLLGGIVCAKASMLLQNITPAVLVRFLREHRSEWADFSVDAFSAASLKAGSYGYTGMRSTRFTGNQAIMLLGHSIEHEEMLEVIRLEGHAPAHEDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIALLNSQQGDKQNSLTANRALDLTVAPTTTHAAGDTCPNNRCILTVAFQFPFETGLQDNVAAMARQYIRRVVSAVQALATAISPSSANTAGEAKLSPGSPEALTLAQWICQSYSNYLEVPLLRSDSLIGDMVLKHLWHHPDAILCCSLKTVPVFIFANQAGLDMLETTLVALQDITLDKIFNDSARKNLIAYFAKLMQQGFACMPAGICMSTMGRHASYDQAVAWKVHAEDTSVHCLAFSFINWSFI* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4387 833 Pfam Homeodomain 21 79 IPR001356 GO:0003677
Tpr7g4387 833 Coils Coil 86 124 - -
Tpr7g4387 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 833 - -
Tpr7g4387 833 Pfam MEKHLA domain 690 832 IPR013978 -
Tpr7g4387 833 Gene3D - 15 88 - -
Tpr7g4387 833 SMART START_1 160 370 IPR002913 GO:0008289
Tpr7g4387 833 SMART HOX_1 18 84 IPR001356 GO:0003677
Tpr7g4387 833 SUPERFAMILY Homeodomain-like 17 82 IPR009057 -
Tpr7g4387 833 ProSiteProfiles 'Homeobox' domain profile. 16 80 IPR001356 GO:0003677
Tpr7g4387 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 833 IPR044830 GO:0003700
Tpr7g4387 833 Gene3D - 190 369 IPR023393 -
Tpr7g4387 833 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Tpr7g4387 833 CDD bZIP 73 112 - -
Tpr7g4387 833 CDD homeodomain 21 81 IPR001356 GO:0003677
Tpr7g4387 833 Pfam START domain 161 367 IPR002913 GO:0008289
Tpr7g4387 833 SUPERFAMILY Bet v1-like 160 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4387 Tpr-Chr7 52636270 52641852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4387 1 833 Homeobox Transcription Factor Family AT5G60690 73.734 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g4387 START 7.5e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4387 K09338 - gmx:100804870 1295.41