Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4381 ATGGGAAAAGATGTTGAGGTTCAAGAACAAGGTGCTGAATTTTCAGCTAAGGATTATCAAGATCCACCACCAGCACCTTTGTTTGATTTAGATGAATTTACAAAGTGGTCTTTGTATAGAGCTGTGATAGCTGAATTTGTAGCAACACTTCTCTTTCTTTATATCACTGTTTTAACCATTATTGGTTATAGTAGACAAAGTGATACTACTATCAAAGGTAATACTGAATGTGATGGTGTTGGTGTTTTGGGTATTGCTTGGGCTTTTGGTGGTATGATCTTTATTCTTGTTTACTGCACCGCCGGTATCTCAGGAGGACACATAAATCCTGCTGTGACCTTTGGGCTATTTGTGGGACGCAAGGTGTCTTTAATAAGGGCAATACTATACATAATTGCACAATGTTTAGGTGCAATTTGTGGTGCTGGACTTGCAAAGGGTTTCCAAACATCATACTACAACAGGTACAAAGGAGGTGTTAATTTGGTTTCTGAGGGTTATAGCAAAGGCACTGCTTTAGGTGCTGAGATTATTGGTACCTTTGTTTTGGTCTACACTGTTTTCTCTGCCACTGACCCTAAGAGAAGTGCTAGGGATTCTCATGTTCCTGTTTTGGCACCACTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCAACAATCCCCGTTACCGGCACCGGCATTAACCCCGCTAGGAGTTTCGGACCAGCCGTTATCTTCAACAACGACAAAGCCTGGGATGATCAGTGGATTTATTGGGTTGGACCATTTATTGGTGCTGCAGTTGCTGCAATCTACCACCAATACATTCTAAGAGGTTCAGCAATTAAGGCTCTTGGATCCTTTAGGAGCAATGCTTAA 864 0.4178 MGKDVEVQEQGAEFSAKDYQDPPPAPLFDLDEFTKWSLYRAVIAEFVATLLFLYITVLTIIGYSRQSDTTIKGNTECDGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAILYIIAQCLGAICGAGLAKGFQTSYYNRYKGGVNLVSEGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFIGAAVAAIYHQYILRGSAIKALGSFRSNA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4381 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 287 IPR034294 -
Tpr7g4381 287 Pfam Major intrinsic protein 33 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 TIGRFAM MIP: MIP family channel proteins 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Tpr7g4381 287 Gene3D Glycerol uptake facilitator protein. 25 287 IPR023271 -
Tpr7g4381 287 PANTHER AQUAPORIN PIP2-7 1 287 - -
Tpr7g4381 287 SUPERFAMILY Aquaporin-like 32 272 IPR023271 -
Tpr7g4381 287 CDD MIP 40 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g4381 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4381 Tpr-Chr7 52581578 52584029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4381 1 285 Major Intrinsic Protein MIP AT5G60660 76.491 1.14e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4381 K09872 - gmx:732581 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4381 7 52581578 52584029 Tpr4g1693 4 17481213 17483271 PCT