Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4379 ATGCAATTGCTGTTAAGGATAAAGCTGCTCCTACTCATAATACTTCAGTTATTATACCTCAGCAAATCAACCTGCAAATCATCTTCTGAAGCTTTGTTAACTTTCAAGGGTTCACTTGAAGCTGGTCCACAAGGATGTCAGATGCAATGGCCTTGTCTTGACTTCTCTAATGAACCAGGTGGAGTAAAAGAAAATATAGACAGCAACAATGAAACTCCAACATTTACACCATCCCTTAAAGAATCACAAGTTAAAAAACAAGGAGGAGGAAGAAGGGTTGCCGCCATAGTTGGTGCTACCGGTGCTGCCTTAGTCATCATCGTGATAGTGGTGATTGTCTATATCTGCTTTAGAAGATGTGAAAGATTTAAAAGACAAACATCTGATTCTGCTTCTTCTGTTCCATCACAAGCTGTTGAGATGGGAAGAATCAACAGCTCGCAGTATGTTAATGCATACTCTCCACAATATATGCAGAACACAAGACTATTAACAATTTTGGAGCTAGAACAAGCTACTGGAAATTTCAGTCAAAGTAGCATCATAGGTGAAGGGAGATTTGGTTTTGTATACAAAGGTTTACTTCGAGATGGATCTTTTGTTGCTATAAAAAGGCGCTTATTTGCTCTTACTCGAGATTTCATCCCAGAGGTTAAGCAGATAGCTCAAATTCATCACATTCATCTTGTTAAGCTTATAGGCTATTATGAAGATAACTATCAACAATTACTTGTGTATGAATATCTCTCTAATGGCAATATAGGGAATCATCTTTATGACGATGAAGGTTTACCTATTGGAAAGCTTGACTTGCGGCGCAGGGTATCCGTTGCCTTAGGCGCGTCAAAAGGACTAGAACATCTTCATAGTTTGGTCCCTCCTATATTTCACACAAATTTTAGTACAATAAATGTTCTGTTAGATGAAAATTATACTGCCAAAGTTTCTGATTATGGATTCTGCAAATTGCAAACAAAAGTTGATCAGGCAGGTTCATCTTCAAAAGTTGACTACTTTCATGATCCAGAGTTGAGCTTATCGCAAAACTATTCGGAGCAGAGTGATGTATACAGTTTCGGAGTGTTTTTACTCGAGTTGGTTAGCGGTTGTGAAGTCCATAACAGAAACATGTCACACCAAGATGAAAATCTAGTATTTCAGGCAAAAAATAGCAATGTTTTGGACAAGTTTATTGACATAACATTGGGAGAGGAAGAAAAGATTGCTGCTAGAAGAATGATGAAGTTGGCTTTAATATGTGTGGATGTGACTAATAGAAGACCATCAATGGCACATATTGTGCAAGAATTGGAGAGGATACAAAGAGATATTGCTACTTTGTATTCTGAAATCAATGAGGAAATTGGTGTTGTCACTCTTGGGAGTGAGCTCTTCCAATAA 1401 0.3776 MQLLLRIKLLLLIILQLLYLSKSTCKSSSEALLTFKGSLEAGPQGCQMQWPCLDFSNEPGGVKENIDSNNETPTFTPSLKESQVKKQGGGRRVAAIVGATGAALVIIVIVVIVYICFRRCERFKRQTSDSASSVPSQAVEMGRINSSQYVNAYSPQYMQNTRLLTILELEQATGNFSQSSIIGEGRFGFVYKGLLRDGSFVAIKRRLFALTRDFIPEVKQIAQIHHIHLVKLIGYYEDNYQQLLVYEYLSNGNIGNHLYDDEGLPIGKLDLRRRVSVALGASKGLEHLHSLVPPIFHTNFSTINVLLDENYTAKVSDYGFCKLQTKVDQAGSSSKVDYFHDPELSLSQNYSEQSDVYSFGVFLLELVSGCEVHNRNMSHQDENLVFQAKNSNVLDKFIDITLGEEEKIAARRMMKLALICVDVTNRRPSMAHIVQELERIQRDIATLYSEINEEIGVVTLGSELFQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4379 466 SUPERFAMILY Protein kinase-like (PK-like) 155 447 IPR011009 -
Tpr7g4379 466 Gene3D Phosphorylase Kinase; domain 1 137 248 - -
Tpr7g4379 466 Pfam Protein tyrosine and serine/threonine kinase 179 437 IPR001245 GO:0004672|GO:0006468
Tpr7g4379 466 ProSiteProfiles Protein kinase domain profile. 176 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4379 466 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 62 464 - -
Tpr7g4379 466 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Tpr7g4379 466 Gene3D Transferase(Phosphotransferase) domain 1 249 458 - -
Tpr7g4379 466 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 62 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4379 Tpr-Chr7 52563338 52566653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4379 91 440 Receptor kinase-like Gene Family AT1G79620 35.326 1.91e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Tpr7g4379 PK_Tyr_Ser-Thr 2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4379 - - gmx:100780443 604.749