Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4373 ATGCTGATGGCAGAATATAGGAGTTTTTCATTTACTAAAATGATTGGCTGCTGGAGTTGTTTTGGGTTGATAAGAAAGCCGACACGTACACGTACTAAGCGCCGCGGCGGCATCAAAAATTTTCTCTCCCAAGGGCTATTGACGGATGGAGAAACTGAATGTGATGAGGTATCATTTAGTGGTGACTATACCAGTAACACAACCAGTGGTGATGAGCAAAATTTACCCAATCGTTCCGAGGATATTTTGAACTTTAGAGCAGAGAATGGCATGATTTGTAGGCCTTTTCCTGTTAAGGAGACTGACAAACTTGTTCGATCAGAGGATGAAAACGGAACCAAGATGTTAAATGAGTATATTCGAGAATATAAGATTGGTTCTGGTAGCTATGGCAAAGTGGCTCTTTACAAAAGTAGCGTTGATGGAAAGCATTATGCAATTAAGTCCTTTCACAAGTCTCACTTACGGAAGCTTCGAGTTGCTCCATCTGAGACTGCCATGACTGATGTTCTACGTGAGGTACTTATCATGAAAATGCTGGAACATCCTAATATAGTTAATCTCATCGAGGTGATTGATGACCCAGAGTCAGATGACTTCTACATGGTACTGGAATATGTGGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCGACAGTGTGCCATAGGTGAAGAAACCGCTAGGAAATACATGCGTGATATAGTCTCGGGATTAACATATCTTCATGCTCATAATATAGTGCACGGGGATATAAAACCTGATAACCTGTTGATTACTCGCGATGGGACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGACTGGTAACGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCATGGTAAAGCTTCAGACACATGGGCAGTCGGAGTTACTTTGTACTGTATGATATTGGGCGAATACCCATTCCTCGGAGACACACTTCAAGATACATACGACAGAATAGTCAATAATCCTATAGAAATCCCAGATGACGTAAACCCGCAGTTAAAGAATTTAATAGAAGGATTGCTTTGCAAAGACCCAGAACAAAGGATGACGTTACCTGAAGTTGCCGAGCATGTCTGGGTTATTGGAAATGATGGGCCAATTGGCGAGTACCACTGTTGGTGCAAACGCAAGAGTGTGGTGAGTGTAGACTTTGAGGAGAGCAATGTGCTTGTTTGA 1236 0.4248 MLMAEYRSFSFTKMIGCWSCFGLIRKPTRTRTKRRGGIKNFLSQGLLTDGETECDEVSFSGDYTSNTTSGDEQNLPNRSEDILNFRAENGMICRPFPVKETDKLVRSEDENGTKMLNEYIREYKIGSGSYGKVALYKSSVDGKHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRQCAIGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRDGTVKIGDFSVSQAFETGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIEIPDDVNPQLKNLIEGLLCKDPEQRMTLPEVAEHVWVIGNDGPIGEYHCWCKRKSVVSVDFEESNVLV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4373 411 SUPERFAMILY Protein kinase-like (PK-like) 115 389 IPR011009 -
Tpr7g4373 411 SMART serkin_6 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4373 411 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Tpr7g4373 411 Pfam Protein kinase domain 121 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4373 411 Gene3D Phosphorylase Kinase; domain 1 113 216 - -
Tpr7g4373 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Tpr7g4373 411 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 9 408 - -
Tpr7g4373 411 CDD STKc_LKB1_CaMKK 125 380 - -
Tpr7g4373 411 Gene3D Transferase(Phosphotransferase) domain 1 217 387 - -
Tpr7g4373 411 ProSiteProfiles Protein kinase domain profile. 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4373 411 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 9 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4373 Tpr-Chr7 52503525 52509328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4373 125 386 CBL-interacting serine-threonine protein kinases AT5G10930 32.830 3.49e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Tpr7g4373 Pkinase 3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4373 K00908 - gmx:100776013 687.567