Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4372 ATGTTAAATGAGTATATTCGAGAATATAAGATTGGTTCTGGTAGCTATGGCAAAGTGGCTCTTTACAAAAGTAGCGTTGATGGAAAGCATTATGCAATTAAGTCCTTTCACAAGTCTCACTTACGGAAGCTTCGAGTTGCTCCATCTGAGACTGCCATGACTGATGTTCTACGTGAGGTACTTATCATGAAAATGCTGGAACATCCTAATATAGTTAATCTTATCGAGGTGATTGATGACCCAGAGTCAGATGACTTCTACATGGGTACTCATGATTATTTTGCTACATATATGTTTGAGCCTTAA 306 0.3791 MLNEYIREYKIGSGSYGKVALYKSSVDGKHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMGTHDYFATYMFEP* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4372 101 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 89 - -
Tpr7g4372 101 Pfam Protein kinase domain 6 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4372 101 Gene3D Phosphorylase Kinase; domain 1 1 99 - -
Tpr7g4372 101 ProSiteProfiles Protein kinase domain profile. 5 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4372 101 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Tpr7g4372 101 SUPERFAMILY Protein kinase-like (PK-like) 2 87 IPR011009 -
Tpr7g4372 101 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4372 Tpr-Chr7 52477452 52479241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4372 11 81 CBL-interacting serine-threonine protein kinases AT5G35410 38.028 1.02e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Tpr7g4372 Pkinase 3.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4372 K00908 - gmx:100776013 171.4