Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4361 ATGGAGGGACAACAAAAGGGATCCAAATCTAGTTACATTTTTCCGCCCGGTTTTCGATTCCATCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAGTCGCGTCCGCTTCCAGCTTCTATTATAGCTGAAATTGATCTCTATAAGTATAATCCATGGGAGTTACCAAAGAAGTCTTTATTTGGGGAGGGAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTACCCGAATGGATTAAGGCCGAATAGAACAGCAGCTTCAGGATACTGGAAAGCAACTGGAACTGATAAGCCAATAATTTCTTCTTGTGGATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGTTCAAAGACAGATTGGATCATGAATGAGTATAGGTTGGTTGACACAACTACAAAATCATTCAGACTAAAAGGTTCGATGCGGTTGGATGACTGGGTATTGTGTCGGGTTCGACATAGAGGCTACTCAATGAAGAATTTATCAGAGAATCAAGAGATTCCTTGCGAACCAAGCATGCCAGTAAACCTACCGAAAGTGGAAGAACAACGCCCAGCAAACACGAACTTTAGAGCCGACATGATCACAGATTATCAGTACAAAGACTATCAGATCATAGCATCTATTCTTGTTGGTGGAGTTATACCTCCAACTGAGAACATGTCAAGTTTCAGCTTTGATGGAAGCAAAGGAGATAATCTAACATCAGTTTATGAAGAAGGTTTCAATAAAGTGAATTCTCAAACTTCAATCCCTTCTTTGGAATGTTACTTCAACTCACTGAAAAGGAAATCTATTGAGGATGATGATCAGTTTGAAAATCTAATTTCTTTTAACAGTAGGTTCAACACTGTAAACAAAATAGACAAATCTCCTAGCATCGATTTTAAAGCGCTAAACGAATTAAACTTTGCAGAAAGATACCAGCAGTGA 975 0.3877 MEGQQKGSKSSYIFPPGFRFHPSDEELIVHYLQNKIKSRPLPASIIAEIDLYKYNPWELPKKSLFGEGEWYFFSPRDRKYPNGLRPNRTAASGYWKATGTDKPIISSCGSKHIGVKKALVFYSGRPPKGSKTDWIMNEYRLVDTTTKSFRLKGSMRLDDWVLCRVRHRGYSMKNLSENQEIPCEPSMPVNLPKVEEQRPANTNFRADMITDYQYKDYQIIASILVGGVIPPTENMSSFSFDGSKGDNLTSVYEEGFNKVNSQTSIPSLECYFNSLKRKSIEDDDQFENLISFNSRFNTVNKIDKSPSIDFKALNELNFAERYQQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4361 324 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Tpr7g4361 324 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 308 - -
Tpr7g4361 324 PANTHER NAC TRANSCRIPTION FACTOR 56 10 308 - -
Tpr7g4361 324 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Tpr7g4361 324 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Tpr7g4361 324 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4361 Tpr-Chr7 52363553 52365561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4361 10 241 NAC Transcription Factor Family AT1G69490 53.219 2.53e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g4361 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4361 - - gmx:100817193 492.271