Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4360 ATGTCTGTCATCGACATTCTCTTCCGTGTCGACGAGGTTTGCAAAAAATATGACAAATACGACATTGACAAACAGCGTGAACAGAACGCTTACGGTGATGACGCATTCGCTCGTGTCTATGCCGTGGTTGATTCCACCATTCAACAAGCTCTCATTAAATCTGAGGCTGCTGCTAAGGAGAGTAACAGGGCAGTTGCTGCAGCTTGGAATGCTGAGGTTCGTAGAGCCAAGGGGCGATTGATGGACGAAGTTCCTAAACTTCGTAAGCTCGCTAATAAGAAGGCTAAAGGTCTAACAAAGGAAGACATAGCCATTCGTCAAGATCTTGTTCTTGCATTGCCAGAAAGAATCCAAGCAATACCAGACGGCATTACATCTGCTGCTAGTCATACCGGAGGATGGGCAGCTACATCAGCTCATCCGCATATCAAGTTTGATTCACCAGAAGGACCTGTTGACAGTGATTATTTCAGTCATAGTGAAGAATCCAGTCAGTTTCGAAATGAATATGAAATGCGCAAGTTGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTAGATACTTTGAAAAATCTAGCACTTGATATGAATGAGGAATTGGATCGGCAAGTTCCTTTAATGGATGAAATTGACTCAAAGGTGGATAGGGCAAACAGTGAAGTGAGAAACACTAACTTAAGGCTGAAGAAAACTATCACCGAGATGAGGTCCAGTCGAAATTTCTGCATCGACATCACTCTAATGTGTGTTCTTCTGGGAATCATTATGTGGTTATACAAGTAA 789 0.4259 MSVIDILFRVDEVCKKYDKYDIDKQREQNAYGDDAFARVYAVVDSTIQQALIKSEAAAKESNRAVAAAWNAEVRRAKGRLMDEVPKLRKLANKKAKGLTKEDIAIRQDLVLALPERIQAIPDGITSAASHTGGWAATSAHPHIKFDSPEGPVDSDYFSHSEESSQFRNEYEMRKLKQDEGLDIISEGLDTLKNLALDMNEELDRQVPLMDEIDSKVDRANSEVRNTNLRLKKTITEMRSSRNFCIDITLMCVLLGIIMWLYK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4360 262 Pfam SNARE domain 208 257 IPR000727 -
Tpr7g4360 262 PANTHER SYNTAXIN 1 260 IPR045242 -
Tpr7g4360 262 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Tpr7g4360 262 Gene3D - 171 232 - -
Tpr7g4360 262 PANTHER SYNTAXIN-72 1 260 - -
Tpr7g4360 262 Coils Coil 209 229 - -
Tpr7g4360 262 SUPERFAMILY SNARE fusion complex 165 232 - -
Tpr7g4360 262 CDD SNARE_Qc 176 232 - -
Tpr7g4360 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Tpr7g4360 262 SMART tSNARE_6 166 233 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4360 Tpr-Chr7 52361058 52363097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4360 1 261 SNARE and Associated Proteins AT3G09740 64.259 1.11e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4360 K08506 - gmx:100777251 414.461