Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4351 ATGGAGAATGTTACAAACAAAATTACAAACACGTCAATTTCCTCTCCTCTATTTTTTAACTCTTCAACTTCTTCACAACCAACTTTGGTTCCTCAAGTTGTCATGAGTCCTTGTGCTGCTTGCAAAATTTTGAGAAGAAGATGTGCTGAAAAATGTATGTTGGCACCTTATTTTCCTCCCACTCAACCTTCCAAATTTACCACTGCTCATCGTGTATTTGGTGCTAGCAACATCATTAAGATCTTACAGGAACTTCCAGAGTCTGAAAGAGCTGATGCAGTTAACAGCATGGTTTATGAAGCCAGTGCAAGAATTAGAGACCCTGTATATGGATGTGCAGGTACAATTTGTCACCTCCAAAAGCAAGTCAATGAGCTTCAAGCACAATTAGCTAAGTCACAAGCTGAACTTATTAACATGCAATTGCAACAATCCAATCTACTATCTCTTATTTACATGGAAATGAATGAAACTCCAAATGAATCATCACCACAAGAATCAGTTGACAATTTCATTTCTAGTCCTAACTACAGCAGTGATTATCAAAATAATCTCAACTTCTTTGAGGAGAACACTAACCCAAATTTATTGTGGGAGCCTCTTTGGACATGA 612 0.3742 MENVTNKITNTSISSPLFFNSSTSSQPTLVPQVVMSPCAACKILRRRCAEKCMLAPYFPPTQPSKFTTAHRVFGASNIIKILQELPESERADAVNSMVYEASARIRDPVYGCAGTICHLQKQVNELQAQLAKSQAELINMQLQQSNLLSLIYMEMNETPNESSPQESVDNFISSPNYSSDYQNNLNFFEENTNPNLLWEPLWT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4351 203 Pfam Lateral organ boundaries (LOB) domain 37 134 IPR004883 -
Tpr7g4351 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 200 - -
Tpr7g4351 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 18 200 - -
Tpr7g4351 203 ProSiteProfiles LOB domain profile. 36 137 IPR004883 -
Tpr7g4351 203 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4351 Tpr-Chr7 52292940 52295922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4351 33 203 AS2 family AT2G28500 65.946 1.56e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g4351 LOB 1.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4351 - - gmx:100819336 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4351 7 52292940 52295922 Tpr4g1739 4 17942504 17945740 PCT