Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4347 ATGTTTCCCGGGAAAATGGAACAGTTCATTGATAACTTACCGCCGATGGATCTGATGCGATCGGAGAAGATGACGTTTGTTCAACTAATTATTCCGGCTGAATCTGCTCACCGTGCAATTTCATATTTAGGTGAACTCGGTCTTCTTCAATTCCGAGACTTAAATGCTGACAAAAGCCCTTTCCAGAGAACGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAGCTACGATTTTTCAAGGATCAAGTCAATAAAGCGGGTCTAATGTCGTCTTCTCGCACTCTATTGCAACCGGACATTGACTTGGAGGATTTAGAGGTACATCTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCCAATAGTGACAAACTTCGGCAATCATATAATGAACTTTTGGAATTCAAGATTGTACTACAAAAGGCATCTGGTTTTCTTATTTCGAGTCATGGCCGTGCTGTTTCAGGTGAGATAGAACTACAAGATAATGGATACTCAAATGATGACTATGGCGATACAGCATCTTTGCTTGAACAGGAAATGAGACCCCAACCATCAAATACATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGCTCTTAGATTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGTTTTTCAATCAGGCCCCAGCTGGAGAGCAAATCATGGATCCTGTTTCAACTGAGATGATCGAGAAAACAGTATTCGTTGTGTTTTTCTCCGGGGAACAGGCAAGAACGAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATAAGTAAGCATGGGCAAATAACTAGGGAGGTTACGTCACGTCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCGCTAACTTCTATTGCAGACCATCTAGCAAAGTGGATGGACCTGGTAAGAAGAGAGAAGGCCGTGTATGATACATTGAATATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGCAGAGGGATGGTGCCCTATGATTGCAAAAGCACAGATGCAGGAGGTACTGCATCGCGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCAGTGGAAGCCCCACCTACATATTTTAAGACCAACACTTTCACAAATCCGTATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTGTTATATTCCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAAAACAAGCTCAGTACACAGAAACTTGGAAGCTTCATGGAGATGCTATTTGGTGGGCGCTATGTGATTCTTTTGATGTCACTGTTTTCAATCTATTGTGGGTTAATCTACAATGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTCCATCAGCTTTTCGATGCCGTGATACTTCATGCAGGGATGCATATACTACTGGCTTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAGTTGGCCTTTCTGAACTCTATGAAGATGAAAATGTCCATTCTGTTTGGTGTGGCACATATGAATTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGGTACCAATTTGTGCCACAGATGATTTTCCTTAACAGTCTGTTTGGATATCTTTCCCTTCTCATCATTGTTAAGTGGTGTTCTGGCTCTCAAGCAGACCTTTATCACGTGATGATATATATGTTTTTAAGCCCTACAGACGAACTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACGGAGAGATTTCAAGGGCGTAGTTATGGTATTTTGAATTCTTCTGAACTGGATCTTGAGGTGGAGCCAGATTCTGCCAGGGAACATCATCATGAAGAATTCAATTTTAGCGAGGTCTTTGTTCACCAAATGATCCACTCCATCGAGTTTATTTTAGGTTCAGTTTCAAATACGGCATCATATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTGTTGCTTCTTGCTTGGGGGTATGACAATCTCGTCATTCGGTTAGTGGGGCTAACTGTTTTTGCCTTTGCAACTGCCTTTATACTACTTATGATGGAGAGTCTCAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAGCCTTTTTCATTTGCTTCTTTAACAGAGGATGATGATTGA 2478 0.4068 MFPGKMEQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKASGFLISSHGRAVSGEIELQDNGYSNDDYGDTASLLEQEMRPQPSNTSGLRFISGIICKSKALRFERMLFRATRGNMFFNQAPAGEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALTSIADHLAKWMDLVRREKAVYDTLNMLNFDVTKKCLVAEGWCPMIAKAQMQEVLHRATFDSNSQVGIIFHQMDAVEAPPTYFKTNTFTNPYQEIVDAYGVARYQEANPAVYTTVIFPFLFAMMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGPSAFRCRDTSCRDAYTTGLVKYRDPYPFGVDPSWRGSRSELAFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHVMIYMFLSPTDELGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHTERFQGRSYGILNSSELDLEVEPDSAREHHHEEFNFSEVFVHQMIHSIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTEDDD* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4347 825 Pfam V-type ATPase 116kDa subunit family 42 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tpr7g4347 825 PANTHER VACUOLAR PROTON ATPASES 10 825 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tpr7g4347 825 Coils Coil 105 132 - -
Tpr7g4347 825 PIRSF ATP6V0A1 14 825 IPR026028 GO:0000220|GO:0046961
Tpr7g4347 825 PANTHER VACUOLAR PROTON ATPASE A1 10 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4347 Tpr-Chr7 52217949 52228804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4347 6 818 Primary Pumps ATPases(2) AT2G28520 80.368 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4347 K02154 - gmx:100776037 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4347 7 52217949 52228804 Tpr4g1753 4 18081881 18092421 PCT