Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4337 ATGAATCGAATTCACAACAACCGATTTCAAAAACACAAACAACAACAGAAAGAAACAACAACAGCACCGCAAAAAATGAATTCCGTCACCGGAACTCGACCTTCTCCGTCCACCGTACTCGAAGATGGTTGGTCCGTAGAAGCCACGTTCACACTCATCGACGCTTGGGGAAAACTTTACAACAAACTTAACCGCAAATACTTCCGTCAGTATCACTGGAAAGAAATCGCGAAAGCCGTTAACGATCACCACGGTTACAGTCGCAAATCTCGCCGCACTTACGTTCATTGCAAGAATCGAATTGACGCATTAAAGAAGAAGTACGCAATTGAGAAAGCTAGGGTTTCTGAAAACGGTTTTTACGATGATGATGATGCATTTCCTTTTTTCGATAAACTTGATTTGCTAATTGGTGATAGTGATAATTTACCTGCGAAGAAGGTTATTCCGCCATTAGAACCTCCTGTGAAGGTTCCGGCATGGACACTTGCACCGGTTGGTCTTCGATCTGGTGCTCAGAGTGCTCAGAAACGACCTACAACGGCGACAACGGAGGAGGAGAGTGTGGAGGAGGACTCACGTTTTCGCCGGAATTTATCTGCATTTGCTGCAGCGGCTGCTGCAGCAGCAGAAGCAGAGATTGATAATTCAGATTCCGATGATTTGTATTTTGATGATTTAAATAATTTAGATGGTTCAGAGTTGAGCAATGAGAATAGGAAGAGGAAGAGAGGAAGAAAGGATGTGGAGTTTGGTTATAGAGAGGTTGCAGGAAGAACTGTTAGGGAATTTGGGAGTAGAGAGGTTGCAAATGTTATGGAGAAGTCTAGTCAGGTACATGAGAGAGTGGAGTTATCGAAGCAGCGAAGAAATGCTAAGGAGAAGTTTAATGAAGTACACGAGAGAGTTGAGTCATCGAAGCAGCGAAGAAATGCTAGGGAGAAGTTTAGTGAGATACATGAAAGAGTGGAATCGTCGAAGCAGCTAAGAAATGTTGATTTGGAGAAACGGAATATGCAATTTGAAAAGGATTGTCAGAGGTTGCTGCAGCTGCAAAAAACCAACCACTCAAAGGAAACAGAAAGAACGACTTCATTGAATGATCGAAATGAACAAATCTCAAAAGTTAAAAATCTACCAGCTCCTACCCAAAACAGGTCAGATACCCAGTCTACCAAAAGGAACGTTAGAGGTGCCACTCGGATGAAGAAGTTAGAACTTGACCTTATGGATGGACAAAAATTACCGATTGAATTTGATGAATCAACTGCAAAACCGTTAGGGGAAAACAAGACAAAGTTCAAGAGTTATGTGGGTTTCCTTGGTCGAAGCAAAGTCAGTATTTTGACGGATGATTGGGACTCCGTAGATCAGAGCGCGAAGGATGAAATTTGGACAGATATCCTGAAAGTATGGGATGTTCCTCATTCTGGGTTCTTACGAAAGAAATTGGTTGCATATGCGGGTGAGCGTTGGAGGGCATTTAAGACTAATTTGACTTCTAGATATATACATGGGGATCTTAGGGACAGATCTCCTCTTGAGATCTATAATTTTCTTGATGAGGAAACATGGCAGGCGTTTGTTCAGATACGACTGGACCCTTCTTTCCTGGAGATTAGAAAGAAAGCGCAAATGAGTTCGGCTCAGAATAAAACCCCTCACAGATTGTCTCGTGGGGGATATGAGTTGCTCCAAGAGAAGATGATGCAAGAGAAATTAAAAGAAAAGAAAGATACTTTGGGTGGTTCAGTAGCTGCACCTCCATCTCCACCACCACGCCATGAGCAATGGAAGAGAGCACGACAAAAGCCATCAGGAGATTACACATCGGAGGACACACGCATTATTGCCGAGAAAATTGATTCTTTGGTTGAAAAAACATCTCAAGGAACTTTTGTTCCACAAGGACGCAAAGATATTTTGACAGAAGCCATTGGCCGACCTGAGCACTCCGGCTTTGTTCGTGGTGTTGGTCGAGGTGTTGGTATTCGGCAATACTTTGGATCACAACCACGTGGCTCCACCCCTCCTGTTTTGAGTAGTGAACAACTACAGACCATTAAAGTGGAGCTCACTCAGCAAATTAAAGAAGAATTGATGCAGGACCTTGAAGCTATGGGTTTCTCTAAAAAACCCTCGAACTTCCCTACTTGTTCTCGTAATACAGCTGTACCTGCGAGCACAAAGGGTAGTTCATCTATTGTGCCTCCTGTACTGGAGGAGGACGAAATCCCAGAACAATGTGAATTGTATGTTGATAATTTACTCCATCCAGTGGCCTATGGTAATGTATACAAGTTGGGGCCTACCATACATAATCAGATGCTAGAAAATGATATGGTGAGGGTGGCGGTTAGCGAGGTGCTAGAAGGACATGCCGAAGTTCCTATTCCCACCGACGAGGTGGAAACGGTTGAGCAGGCCCTCAACAATTTCATTCAATGGCCAAAAAGACTTGTGCAGATTGTTTCTGATAAGGATTTTGATGTTGATGGATCTGAGAAAGACGACGTTTCGCCCAAAAAGTCTGAGCCTCAACTGGATTCCGCCAAACAATTGGCTGAGAAAGACAATGTTTCGCCCAAAAAGTCTGAGCCTCAACTAGATTCCGTCCAACAATTGGTTTTAAAGGCGGTGTGTATGTCAGAATCTATAAAGCTCGATTTGGAACACGATAGGATGAAGTCTCTTTGGCTCTCACAGAGAGATGTTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGATTGTGGTTAACGTATTTGAATCGGCTTTCTATTAATGTGGGTAAGAATGACTTGTATGGATTTATTGATCCATGTTTCATTCAAAGTCAACATGATCCAACTAATGCTGAAGCCTACATACAAAACAAGTTATCCGATGATAAAAAAGAGTGTTACCTAGCACCTTATCACAACAATCATCATTGGCAATTGCTCATTATTTGTCCTAGGCAGAATAATGTAGTATTCCTATGTTCGTTGGAGAGAAAGCCAGATAAAAATATTATTCACATTGTTGATTCAGCTTTGGATGGATATCATAAGCTGCAAGGTGTTCAAAAGAAGAAGCCAACATGGATTTACCCTATTTGTCAAAGACAACCAGAGAGTTACGAGTCCGGCTACTATATTATGATACATACATTGAATATTGTATCCGCTGGTATTATTAATTTATGGATGCAGATATTTGGAAATCCAGAACCATTCCAGGAGGATGAACTTGTAAACGTTCAACAACGATGTGCAAGTTTGATCCTTGATTTTATTCAAGGAATTTAA 3303 0.4187 MNRIHNNRFQKHKQQQKETTTAPQKMNSVTGTRPSPSTVLEDGWSVEATFTLIDAWGKLYNKLNRKYFRQYHWKEIAKAVNDHHGYSRKSRRTYVHCKNRIDALKKKYAIEKARVSENGFYDDDDAFPFFDKLDLLIGDSDNLPAKKVIPPLEPPVKVPAWTLAPVGLRSGAQSAQKRPTTATTEEESVEEDSRFRRNLSAFAAAAAAAAEAEIDNSDSDDLYFDDLNNLDGSELSNENRKRKRGRKDVEFGYREVAGRTVREFGSREVANVMEKSSQVHERVELSKQRRNAKEKFNEVHERVESSKQRRNAREKFSEIHERVESSKQLRNVDLEKRNMQFEKDCQRLLQLQKTNHSKETERTTSLNDRNEQISKVKNLPAPTQNRSDTQSTKRNVRGATRMKKLELDLMDGQKLPIEFDESTAKPLGENKTKFKSYVGFLGRSKVSILTDDWDSVDQSAKDEIWTDILKVWDVPHSGFLRKKLVAYAGERWRAFKTNLTSRYIHGDLRDRSPLEIYNFLDEETWQAFVQIRLDPSFLEIRKKAQMSSAQNKTPHRLSRGGYELLQEKMMQEKLKEKKDTLGGSVAAPPSPPPRHEQWKRARQKPSGDYTSEDTRIIAEKIDSLVEKTSQGTFVPQGRKDILTEAIGRPEHSGFVRGVGRGVGIRQYFGSQPRGSTPPVLSSEQLQTIKVELTQQIKEELMQDLEAMGFSKKPSNFPTCSRNTAVPASTKGSSSIVPPVLEEDEIPEQCELYVDNLLHPVAYGNVYKLGPTIHNQMLENDMVRVAVSEVLEGHAEVPIPTDEVETVEQALNNFIQWPKRLVQIVSDKDFDVDGSEKDDVSPKKSEPQLDSAKQLAEKDNVSPKKSEPQLDSVQQLVLKAVCMSESIKLDLEHDRMKSLWLSQRDVMELCMGKQELSITILRLWLTYLNRLSINVGKNDLYGFIDPCFIQSQHDPTNAEAYIQNKLSDDKKECYLAPYHNNHHWQLLIICPRQNNVVFLCSLERKPDKNIIHIVDSALDGYHKLQGVQKKKPTWIYPICQRQPESYESGYYIMIHTLNIVSAGIINLWMQIFGNPEPFQEDELVNVQQRCASLILDFIQGI* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 354 368 - -
Tpr7g4337 1100 Coils Coil 282 309 - -
Tpr7g4337 1100 Coils Coil 331 351 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 575 613 - -
Tpr7g4337 1100 Gene3D Adenoviral Proteinase; Chain A 879 1095 - -
Tpr7g4337 1100 PANTHER OS10G0338966 PROTEIN-RELATED 853 1048 - -
Tpr7g4337 1100 PANTHER OS10G0338966 PROTEIN-RELATED 323 855 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 169 191 - -
Tpr7g4337 1100 SUPERFAMILY Cysteine proteinases 895 1065 IPR038765 -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 595 613 - -
Tpr7g4337 1100 Gene3D - 44 109 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 1 36 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 280 319 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 832 864 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 832 867 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 353 399 - -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 369 396 - -
Tpr7g4337 1100 Pfam Myb/SANT-like DNA-binding domain 42 135 IPR044822 -
Tpr7g4337 1100 MobiDBLite consensus disorder prediction 16 36 - -
Tpr7g4337 1100 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 853 1048 - -
Tpr7g4337 1100 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 323 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4337 Tpr-Chr7 52103097 52108694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4337 27 181 Trihelix Transcription Factor Family AT3G14180 40.127 1.07e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g4337 Myb_DNA-bind_4 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4337 - - mtr:MTR_2g092960 1188.33