Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4302 ATGAGTAATTTTAATGATGATAGAAACCATGATGATGAACATAATTATTATCCATTTGGAAATATCTATCGTGGATCAAGTCAGAGCAATTTCAACAAAAAAATCTTGTTAACAGCCATAGTTTCTTTAATACTTGTATTAATTTTGGTCTTTGCTCTTCATCTCTACGCAAGATATGTTCTCAAACGCCAAGCTCGTCGGAGAGCCGCCATTCATCAACTCAGCCTCACCGTCGCTCAAGCTCATACACAATTCACCGAACCAGCTAGCACTGGACTCGACCAAACCCTCATCGCTACTCTTCCAACTTTCCTCTTCAAAGGTAAACAACAAGACAAAAAACAAAACAATGATGTTTTGAATGTTGTTGAATGTGCAGTGTGTTTGAGTGTTGTAGAGGATGAAGAAATGATGAGGTTGCTTCCAAATTGTAAGCATAGTTTCCACGTGGGTTGCATCGATAAGTGGTTAGCTTCACATTCCACGTGTCCAATTTGTCGAACCAAGGTTGAACCGCGGCTAGAACCAGAGGCACGTGAGGGTCCCACTTTGTTCGAACCACCATTAGAAGGTACATCGGATGGTGATGGTGGTGTTAGTGGGTCCCCAAAAAATATTTCACGGTTGAGCTCTTTTCGAAGGATTCTTACTAGAGATAGATCTTCGAGACGAATCCAACCTTCTAGTACTCCACGTGATGATGTTATTATTGATCGTGATTTAGAAAGGCAATAA 735 0.4068 MSNFNDDRNHDDEHNYYPFGNIYRGSSQSNFNKKILLTAIVSLILVLILVFALHLYARYVLKRQARRRAAIHQLSLTVAQAHTQFTEPASTGLDQTLIATLPTFLFKGKQQDKKQNNDVLNVVECAVCLSVVEDEEMMRLLPNCKHSFHVGCIDKWLASHSTCPICRTKVEPRLEPEAREGPTLFEPPLEGTSDGDGGVSGSPKNISRLSSFRRILTRDRSSRRIQPSSTPRDDVIIDRDLERQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4302 244 MobiDBLite consensus disorder prediction 213 244 - -
Tpr7g4302 244 MobiDBLite consensus disorder prediction 177 244 - -
Tpr7g4302 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 173 IPR013083 -
Tpr7g4302 244 MobiDBLite consensus disorder prediction 198 212 - -
Tpr7g4302 244 CDD RING-H2_PA-TM-RING 124 167 - -
Tpr7g4302 244 SMART ring_2 125 166 IPR001841 -
Tpr7g4302 244 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Tpr7g4302 244 PANTHER RING FINGER DOMAIN-CONTAINING 29 244 - -
Tpr7g4302 244 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 29 244 - -
Tpr7g4302 244 SUPERFAMILY RING/U-box 124 173 - -
Tpr7g4302 244 Pfam Ring finger domain 124 167 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4302 Tpr-Chr7 51825124 51827146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4302 5 244 C3H Transcription Factor Family AT2G42360 43.359 8.75e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4302 K19038 - gmx:100796057 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4302 7 51825124 51827146 Tpr7g4302 7 51825124 51827146 ECH