Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4289 ATGACTCAGTGTAGTTACCCTGAAAATAATCATCATAGTGTTCTTATGGAGAGGAGAAAAGATAGCTTAATAAGAACTTGTCCTACTTGTGGTCATCATATCAAATGCCAAGATCAGGGTGCTGGAATTCATGAGTTACCTGGATTACCTGCTGGGGTGAAGTTTGATCCTACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGGTCTGATATTCAAATGCTTCATCCTTTAATTGATGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGCGTTGGCAAAGACGGCCTGATCCGACATTTCTTTCATAGGCCATCAAAAGCATACACAACAGGAACAAGAAAAAGGAGAAAAGTGCACACAGATGAAGATGGAAGTGAAACAAGATGGCACAAAACAGGTAAAACAAGGCCGGTCTATATAAATAGCAAGTTAAAAGGTTACAAAAAAATCCTTGTGCTTTACACTAACTACAGAAAGCAGAGAAAGCCAGAGAAAACAAATTGGGTTATGCATCAATATCATCTTGGAAACAATGAAGAAGAGAAAGAAGGAGAATTAGTAGTTTCCAAAGTTTTCTACCAAACACAACCTAGACAATGTGGTTCATTGATGAAAGAATCATCATCATTTTCTGATCAAAAACTAATTAATGATAATCAAGGTGTGCATGAAGTGGTTAATCATAAAAACAGTGGATTTGTTGAATACTATAATACTTCTTTTATATCTTTTGATCAAGGGGAACAACATAGATCAAACAATGCTCAAGTGGTTTCTCATTTTCCTGTTCATGATGGTAATTCTTTCATTCCTTGA 858 0.3648 MTQCSYPENNHHSVLMERRKDSLIRTCPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVYINSKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKESSSFSDQKLINDNQGVHEVVNHKNSGFVEYYNTSFISFDQGEQHRSNNAQVVSHFPVHDGNSFIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4289 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
Tpr7g4289 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Tpr7g4289 285 MobiDBLite consensus disorder prediction 128 143 - -
Tpr7g4289 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Tpr7g4289 285 MobiDBLite consensus disorder prediction 122 143 - -
Tpr7g4289 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Tpr7g4289 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 284 IPR044799 GO:0003700
Tpr7g4289 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4289 Tpr-Chr7 51747607 51750002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4289 25 227 NAC Transcription Factor Family AT4G28500 76.961 1.23e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g4289 NAM 6.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4289 - - gmx:100791648 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4289 7 51747607 51750002 Tpr7g4289 7 51747607 51750002 ECH