Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4265 ATGGATATGATGAGGGCTAATTTTGTTTTGATTATGTCAATGATCATGCTTAGTTTTTCATTGTCATATGGTTACAAATTTAACGTTGGTGGCAACGATGGTTGGGCAGTGAAACCTTCAAAATGGTATGGTCAATGGGCTGAGAATAATAGGTTCCTAATCAACGATACACTTTATTTTAAGTATACCAAGGGATCTGATTCAGTGTTGGTGGTAAGCAAAAAAGACTACTACTCATGCAACATAGGGAATGCGATCCAGAAATTGGACGGTGGAGATTCAACTTTCACATTTGACAAATCAGGTCCTTTTTTCTTCATTAGTGGAAACGTTGAAAATTGCAAACAGGGTGAAAAATTGATCGTTGTTGTTTTGTCACCAAATCATCGTAAACAAGGTCCATCATCAGCACCTTCACCATCATGGAGTTCCCCGTCACCGGCATCGACACCTGTATCGAATGCTCCTTCACCAACATCAAGGGCTCCTACACCGGCATTGACTCCTTCACTGACACCTAAATCAAGTGCTCCTTCACCAACAACGAAGGCTCCTTCACCTGCATTGACTCCAGCACGGACACCAAAATCAAATGCTCCTTCACCAACATCTAAGGCTCCTTCACCTGCATTGACTCCAGCATCGACACCTAAATCAAATGCTCCTTCACCAACATCGAAGGCTCCTTCACCAACATCGACTCCGGCATCCAATGCTCCTTCACCAACATCAAAGACTCCTTCACCATTATATACACCACCATCGGATGTTCCTTCACCAAAATCTCCGGCCCCATCTCCTGATCATTCGGGTTCTACTAGGTTCGGTGGTTTTGGTGTTGGATTGGTGGTTGCCTTGATCATTGGAAGCTTTGCTATTTAA 882 0.4342 MDMMRANFVLIMSMIMLSFSLSYGYKFNVGGNDGWAVKPSKWYGQWAENNRFLINDTLYFKYTKGSDSVLVVSKKDYYSCNIGNAIQKLDGGDSTFTFDKSGPFFFISGNVENCKQGEKLIVVVLSPNHRKQGPSSAPSPSWSSPSPASTPVSNAPSPTSRAPTPALTPSLTPKSSAPSPTTKAPSPALTPARTPKSNAPSPTSKAPSPALTPASTPKSNAPSPTSKAPSPTSTPASNAPSPTSKTPSPLYTPPSDVPSPKSPAPSPDHSGSTRFGGFGVGLVVALIIGSFAI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4265 293 CDD OsENODL1_like 25 125 IPR041846 -
Tpr7g4265 293 Gene3D - 25 136 IPR008972 -
Tpr7g4265 293 MobiDBLite consensus disorder prediction 246 265 - -
Tpr7g4265 293 MobiDBLite consensus disorder prediction 131 272 - -
Tpr7g4265 293 MobiDBLite consensus disorder prediction 146 245 - -
Tpr7g4265 293 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Tpr7g4265 293 PANTHER BLUE COPPER PROTEIN 3 141 IPR039391 GO:0009055
Tpr7g4265 293 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Tpr7g4265 293 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Tpr7g4265 293 PANTHER EARLY NODULIN-LIKE PROTEIN 3 141 - -
Tpr7g4265 293 PRINTS Proline rich extensin signature 140 161 - -
Tpr7g4265 293 PRINTS Proline rich extensin signature 163 179 - -
Tpr7g4265 293 PRINTS Proline rich extensin signature 183 200 - -
Tpr7g4265 293 PRINTS Proline rich extensin signature 202 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4265 Tpr-Chr7 51586432 51588031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4265 10 193 Phytocyanin Superfamily AT5G53870 45.026 7.84e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4265 - - ghi:107886785 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4265 7 51586432 51588031 Tpr7g4265 7 51586432 51588031 ECH
Tpr7g4265 7 51586432 51588031 Tpr7g4265 7 51586432 51588031 PCT