Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4259 ATGTCTTTTCTCTTAATCCTCAACATAACACTATTATTATTAGTTTTGTTTTCAGTTACACTTTCATCATCATCATCATCATCTTCAACTGAATTTGTCTATAACAGAAACTTCAACTCAACAAACATAAACATTTATGGAAATGCAACAATTCAAAACTCAATTCTCACTCTTACAAACCAAACATTCTTTTCAATTGGTCGTGCTTTTTACCCTCAAAAACTACCTACAAAACAAAACAAAAATTCTTCAATTTTTCTTCCTTTTGCAACATCTTTCATATTCTCAATTTCTCCATGCAAAAATTTCCCAGTTGCTCATGGTTTTGCTTTCATTTTCTCACCTTCAATGGTAATCAATGGAGCACTATCAGGAAATTATCTTGGACTGTTTAATAGATCAAGTTCAGGTGATGATTCTAACCATGTTTTTGCTGTTGAATTTGATGATTTTAGAAATGAAGAATTTGAAGAAGTTAATGATAATCATGTTGGTGTTGATTTGAATTCAATGATTTCTAAGTATTCTGAACCTGCTGAATTTTGGGGTGGAAAAAATGGTGAAAAATTGGAAAAATTGAAACTTTCTAGTGGGGAAAATTATCAAGTTTGGATTGAATTTAGGGATTTTGAAATTAATGTTACTATGGCTCCGGCGGGGAAAAGAAAACCTAAAAAGCCTTTGATTAGTAAGCCTATTAATTTTTCTAGGGTTTTTTTGGATGAAATGTATGTTGGATTTTCTGGATCAACTGGGAAAATGGTTGATACTTGTAGAATTTTGGCTTGGAGTTTTAGTCATTCAAATTTTTCGATCGGTGATGCTTTGAATACTAAGCATTTACCTAACTATGTGAATCCAAAGAAATTCATGTATAAATCTAAGGTTTTCATTATATGTGTGATTTTCGGTTTAGTTTTAGTCTTCGGTTGTTGCAGTTTGGTTTTATTCATTTTGATGAGAAAAAGAAAGGAAGAAAAAGAGGGAGAATTTGAAGATTGGGAATTGGAATATTGGCCTCATAAGATTAGCTATAAGGAGATTTGTGATGGAACAGGTGGATTTTGTGAAGAGAATGTGATAGGGATTGGAACAAGTGGGAAAGTATATAAAGGAGTTTTGAACGGCGGAGAAGAAGTCGCAGTGAAGAGATTCAATCATGATACTCAACATGGAATGCGAGGCTTTTTAGCAGAGATTTCGAGTTTAGGAAGAATGAAACATCGAAACTTGTTGGGTTTCAAAGGTTGGAGTAAAGGAAAAGGAGGGAAATTGATATTGGTTTATGATTACATGGAGAACGAGAGTTTAGACAAAAGAATCTTCGAGTGTGAAGAGACCAAGTTGCTTAATTGGGAACAAAGAATAAGAGTTTTGGAAAATGTAGCTAGTGGAGTTTTATATCTACATGAAGGTTGGGAATTTGAGGTTTTGCATAGAGATATAAAAGCAAGTAATGTACTTCTTGACAAAGATATGAATGCAAGAATCGGTGATTTTGGACTTGCTAGATTGCAGCATCAAGAACTAGTAACTGACACAACAAGAGTGGTAGGCACTTTAGGGTACATGGCACCGGAATTAGTCAAAGTTGGTAAACCTTCAACTGCAACTGATGTTTATAGTTTTGGAATATTGGTTTTAGAAGTTGTTTGTGGTAGAAGACCAATTGTAATGGATGAGCCACCATTGGTTGAATTGGTATTTTCTCTTATGGAGAAAGGTGAGTTAAGTAATGCAGTCGATGAACGTTTGAAGAGACAAATAGAGTGTAAATATAACATCGTGGTCGCTGAGAGATTGCTTCATTTGGGTTTGTTATGTGCTAGTTTTGACCCTTGTGTTAGGCCTACAATGAGACAGGTTGTGAAAGCTCTGGAGGGTGTAAAATGCACCGAGTGTAATGAAGAATGTGTTCATGTGAGTCTTATTAGAAAAGTAAACTCAGCAGCATCTTGGTCTAAGAGTTCTACCGATTCTGCACGTGTAAATTTTCCTACCCTTGATGACATTTTACCATATAAATATTTTTCTGGAGATTCTTTAAGTGTATCGTGTTTCAGCGTAGAGCCGATATCTGATTCTCTCTCCGAAGGAAGGTGA 2103 0.3476 MSFLLILNITLLLLVLFSVTLSSSSSSSSTEFVYNRNFNSTNINIYGNATIQNSILTLTNQTFFSIGRAFYPQKLPTKQNKNSSIFLPFATSFIFSISPCKNFPVAHGFAFIFSPSMVINGALSGNYLGLFNRSSSGDDSNHVFAVEFDDFRNEEFEEVNDNHVGVDLNSMISKYSEPAEFWGGKNGEKLEKLKLSSGENYQVWIEFRDFEINVTMAPAGKRKPKKPLISKPINFSRVFLDEMYVGFSGSTGKMVDTCRILAWSFSHSNFSIGDALNTKHLPNYVNPKKFMYKSKVFIICVIFGLVLVFGCCSLVLFILMRKRKEEKEGEFEDWELEYWPHKISYKEICDGTGGFCEENVIGIGTSGKVYKGVLNGGEEVAVKRFNHDTQHGMRGFLAEISSLGRMKHRNLLGFKGWSKGKGGKLILVYDYMENESLDKRIFECEETKLLNWEQRIRVLENVASGVLYLHEGWEFEVLHRDIKASNVLLDKDMNARIGDFGLARLQHQELVTDTTRVVGTLGYMAPELVKVGKPSTATDVYSFGILVLEVVCGRRPIVMDEPPLVELVFSLMEKGELSNAVDERLKRQIECKYNIVVAERLLHLGLLCASFDPCVRPTMRQVVKALEGVKCTECNEECVHVSLIRKVNSAASWSKSSTDSARVNFPTLDDILPYKYFSGDSLSVSCFSVEPISDSLSEGR* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4259 700 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Tpr7g4259 700 PANTHER LECTIN RECEPTOR KINASE 9 681 - -
Tpr7g4259 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Tpr7g4259 700 PANTHER - 9 681 - -
Tpr7g4259 700 CDD lectin_legume_LecRK_Arcelin_ConA 30 266 IPR001220 GO:0030246
Tpr7g4259 700 Gene3D Transferase(Phosphotransferase) domain 1 432 648 - -
Tpr7g4259 700 SMART serkin_6 355 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4259 700 Gene3D - 28 280 - -
Tpr7g4259 700 Pfam Protein kinase domain 357 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4259 700 ProSiteProfiles Protein kinase domain profile. 355 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4259 700 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 270 IPR013320 -
Tpr7g4259 700 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Tpr7g4259 700 Pfam Legume lectin domain 30 269 IPR001220 GO:0030246
Tpr7g4259 700 SUPERFAMILY Protein kinase-like (PK-like) 333 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4259 Tpr-Chr7 51534152 51536672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4259 28 578 Receptor kinase-like Gene Family AT4G04960 54.496 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr7g4259 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4259 - - mtr:MTR_2g090410 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4259 7 51534152 51536672 Tpr7g4258 7 51531347 51533805 PCT