Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4258 ATGTCTCAACTTAAGCAACTTCTCATTCTTCTTCACACTGTAACCATATTTATATGTTGTGTGTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCAACAAACATTATGCTATATGGAAATGCAACCATTCAAAACTCCATTCTCACTCTCACTAATGGCACTTATTTCTCTATAGGTCGTGCTTTTTACCCTCAAAAAGTACTAACCAAACCACTCAACTCTTCCACTCTTCTCCCCTTTGCTACTTCATTCATTTTCTCAGTTTCCCCCATCAAAAACATTATCACAGGACATAGTTTTGCCTTCATATTCACACCTTCAAGAGGTCTAAATGGAACAACATCAGCTCAGTATACTGGTCTCTTCAATTACACCAATGAAGGTAATCCTAACAACCATGTTTTTGGAGTTGAATTTGATATCATTAGAAACGAAGAATTCAACGATACAAATGGTAATCATGTTGGTATCGACGTAAATTCTCTTAAATCCTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAATATGACAATGAGTTTAAGGTGTTGAACATTAAAAGTGGAGAAAATTATCAAGTATGGATTGAATTTATGCACTCTAAGATAAACGTTACTATGGCTCGGGCAGGACAAAAGAGGCCTCATGTTCCTCTCATCAGTATAAATGTTAATCTTTCTGGGGTCCTTATGGATGAAACATACGTTGGATTCTGCGCAGCCACGGGGAAAATAACAGACAGTAGTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCCATTGGTGATGCTTTAGTGACAAACAAATTGCCTTCATTTGTGCTTCATGAGGGGTGGTTTTCTGGAGCAAAAGCTATTGCTGTAGGAGTCACCAGTGTTGTCTGCATATTAATCATCGGTTGTGGTTGTGCAGTGGTTTTCATTCTCTCTAGGAGGAACGAGGCAGAGGAAGAAATTGAAGAGTGGGAACTAGAATACTGGCCACATAGAATTAGATTCGAAGAGATTCATGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGATTTCTGTAGGAGGGAATGGAAAGGTATATAAAGGTATTTTGCAAGGAGTCGAAGTTGCAGTCAAGAGAATCCCTCAAGAAAGAGAAGATGGAATGCGAGAGTTTTTGGCTGAGGTTTCAAGCATAGGAAGAATGAAACACAGAAATTTAGTAGGACTGAGAGGTTGGTGCAAAAAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGAACAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCGCAGGGATTCTTTACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAACAATGTTCTACTTGACAAGGAAATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGACAAGTTGCCGGCACGACAAAAGTATTGGGAACATTAGGATACATTGCTCCGGAAGTGATTCGAACAGGAAAAGCATCGACTATGTCTGATGTGTTTGGCTTTGGTATATTGTTGTTGGAAGTAATATGCGGACGAAGACCTATTGAAGAACATAAGCCAGGGCTAACTGAATGGGTGAAGTCTTTAATGGTGCTTGGCCAATTACACAATGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGCTACCCTATTGAGGAAGCTGAAAGATTTCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTGGAGGGAGAAATGGATAGCATTGAATCTGATGAAGGAAATATGCAGAAAAGTTTACTTGGAAGATTAAAATCAACTGCAATGTGGTCTAGAACTGAGAGTGGATACAATGATCACCCTACTTTTGAAGAAATTATGATGTTAATTGATAATTCCAAGACATCTACAAGTGGTTCAACTGCTATTCAAGCATCAGATTCAGATATCATTTGGGAAGGCAGATAA 2070 0.387 MSQLKQLLILLHTVTIFICCVSTTEFVYNTNFNSTNIMLYGNATIQNSILTLTNGTYFSIGRAFYPQKVLTKPLNSSTLLPFATSFIFSVSPIKNIITGHSFAFIFTPSRGLNGTTSAQYTGLFNYTNEGNPNNHVFGVEFDIIRNEEFNDTNGNHVGIDVNSLKSLTSHEAGYWGGKYDNEFKVLNIKSGENYQVWIEFMHSKINVTMARAGQKRPHVPLISINVNLSGVLMDETYVGFCAATGKITDSSKILAWSFSNTNFSIGDALVTNKLPSFVLHEGWFSGAKAIAVGVTSVVCILIIGCGCAVVFILSRRNEAEEEIEEWELEYWPHRIRFEEIHAATRGFSEENVISVGGNGKVYKGILQGVEVAVKRIPQEREDGMREFLAEVSSIGRMKHRNLVGLRGWCKKEKGNLILVYDFMNNGSLDKWIFECEEGKMLTWEERIQVLKNVAAGILYLHEGWEVKVLHRDIKANNVLLDKEMNARLGDFGLALMHEHHGQVAGTTKVLGTLGYIAPEVIRTGKASTMSDVFGFGILLLEVICGRRPIEEHKPGLTEWVKSLMVLGQLHNAVDERLKAKGGYPIEEAERFLHLGLLCSNSDPSVRPIMRQVVKMLEGEMDSIESDEGNMQKSLLGRLKSTAMWSRTESGYNDHPTFEEIMMLIDNSKTSTSGSTAIQASDSDIIWEGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4258 689 PANTHER - 1 677 - -
Tpr7g4258 689 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Tpr7g4258 689 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Tpr7g4258 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 261 IPR013320 -
Tpr7g4258 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Tpr7g4258 689 Gene3D - 22 266 - -
Tpr7g4258 689 CDD STKc_IRAK 353 618 - -
Tpr7g4258 689 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4258 689 SMART serkin_6 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4258 689 Gene3D Transferase(Phosphotransferase) domain 1 423 638 - -
Tpr7g4258 689 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Tpr7g4258 689 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4258 689 PANTHER LECTIN RECEPTOR KINASE 1 677 - -
Tpr7g4258 689 Coils Coil 309 329 - -
Tpr7g4258 689 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4258 Tpr-Chr7 51531347 51533805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4258 21 564 Receptor kinase-like Gene Family AT4G04960 57.428 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr7g4258 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4258 - - mtr:MTR_2g090410 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4259 7 51534152 51536672 Tpr7g4258 7 51531347 51533805 PCT
Tpr7g4258 7 51531347 51533805 Tpr7g4258 7 51531347 51533805 PCT