Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4257 ATGAAGGTATTGTTGAAAGAGAATAGCATTATTGCATGGTTGAATATTTGCTTGGTGGAGAAAATGGGTTGCATAAATTCCAAGAGTTCAGCTGTGGATGATAGTAGAGAAGGTTTGACAAATGATTCGGGATCATCTAAAAAAAGGAACTTTGAGAAGAAGGTTTCAGGATCAGATTCGAAGAAAAGGGTTGACGGAGATTTGGAGAATGATAAGTTATTGGACGGTATTGGCATGAAAGTTTCATTGATTGACAAGGAAGCTAATAATGGTTCGGTGTGGTTGTATGATGATCAGAATGAGAAGAAGAAAATGGAGAAACCCGAAGTGTCTGTTGTTGTTGATTGTTCGCGTATTGGAAGGGTTCCAAAAGCGTTAGAAGGAGAGCAAGTTGCAGCTGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAATGGATGGATACCGCGAAGTGCACATACTTTTGAGAAATATGATAAAATTGGTGAAGGAACTTACAGCACTGTTTATAAGGCACGTGATTTGATAAACCAAAAGGTCGTTGCCTTGAAGCGGGTACGCTTTGATAATCTTGATCATGAGAGTGTCAAGTTCATGGCAAGAGAAATAGTTTTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAGGGCTTGATAACATCGCAGTCGTCTCGCAGCTTGTACCTTGTTTTTGAATATATGGAACATGATCTTACAGGACTTGCAACAGCACCTGACATTAAGTTTTCAGAACCACAGATTAAATGCTACATGAATCAGCTTCTTAGTGGATTGGATCATTGCCATAGTCGTGGTATCCTCCACCGTGATATAAAGGGCTCAAATCTTCTCATCGACAATAATGGCATTTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTTTTGATCCCGACCAAAGCGTTCCGTTGACCAGCCGGGTAGTAACACTGTGGTATAGACCACCAGAACTTTTACTTGGATCATCAAATTACGGAGTTGCGGTGGATATGTGGAGCACTGGTTGCATACTCGGTGAACTATACTCTGGCAGGCCTATATTGCCAGGAAAAACCGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGATCACCATCTGTGGACTATTGGCAAAAACTGCGGCTGCCACATTCTACAGTATTCAGGCCTCCACACCATTATAGGAAATGCATTGCTGATACATTTAAAGAATTTCCATCTTCTGCTGTGAGGCTTATAGAGACCCTACTCTCTTTAGATCCTACACTCCGAGGAACAGCAGCTACAGCTCTGAAGAGCGAGTTCTTTTCATTGGAACCCCTTGCTTGCGATCCATCAACTTTGCCAAAATATTCTCCCAGCAAAGAGATTGACACTAAATTGCGGGGAGAATCAAGAGGAAGGCAAGGAGCTCTCGAGGGTAAGGAGCAAAAAGTTGGGCCACGAGTTAGACAAGAGAAAGAAACTCAGTCATTTGTCTTATCCAAAGCCAATGCCGACTCCCGCATTTCAGTGCAGCAAGGGCAACGCTTTCCAAACATGACGAGCAAGAATGAACAGTTCAACCCTCACAGAGTACCTCCTGTATCTGGATTTATGGGTTTTCGACACAAACAGTCAGAAGGTGCTAAAAAGAAGGTTAATTATTTCTCTGGGCCTCTTGACCAGAGACCTTCACATTCAGGGTTACTGGTTCCAGATTCGGGCCGACACAAATATGGAAAAGAAGCTGGTGAGAGGTTTCTTCCTGTTTCAAATAAAGTCAATCTATCAAAGCCATCTAGAACTTCATTGTCTGGAAATCAAAAAGTAAATCCAGCTTCTTTGAGTCCACAAGATGCAACTCAAGTACAAAAATCTTTAGGGTTGAGTAACGGATCAGAGTCAAGAAGGCGGCATGATAGAAAACACCATTCTCACATAGATGATCTCAGCCAAACAGAAAATGGAAAGGACGGGCATGCATCCAGCGGAAACAATCTCTACATGTCTGGTCCGTTGCTGGTTTCCAATATGGATCACATGCTCAAAGAGCGGGATCGGAAGATCCAAGAATATTCAAGGCGAACCAGAAATAAATTGGCCTAA 2106 0.4217 MKVLLKENSIIAWLNICLVEKMGCINSKSSAVDDSREGLTNDSGSSKKRNFEKKVSGSDSKKRVDGDLENDKLLDGIGMKVSLIDKEANNGSVWLYDDQNEKKKMEKPEVSVVVDCSRIGRVPKALEGEQVAAGWPTWLSSVAGEAINGWIPRSAHTFEKYDKIGEGTYSTVYKARDLINQKVVALKRVRFDNLDHESVKFMAREIVFLRRLDHPNVIKLEGLITSQSSRSLYLVFEYMEHDLTGLATAPDIKFSEPQIKCYMNQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLANFFDPDQSVPLTSRVVTLWYRPPELLLGSSNYGVAVDMWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSVDYWQKLRLPHSTVFRPPHHYRKCIADTFKEFPSSAVRLIETLLSLDPTLRGTAATALKSEFFSLEPLACDPSTLPKYSPSKEIDTKLRGESRGRQGALEGKEQKVGPRVRQEKETQSFVLSKANADSRISVQQGQRFPNMTSKNEQFNPHRVPPVSGFMGFRHKQSEGAKKKVNYFSGPLDQRPSHSGLLVPDSGRHKYGKEAGERFLPVSNKVNLSKPSRTSLSGNQKVNPASLSPQDATQVQKSLGLSNGSESRRRHDRKHHSHIDDLSQTENGKDGHASSGNNLYMSGPLLVSNMDHMLKERDRKIQEYSRRTRNKLA* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4257 701 PANTHER CELL DIVISION PROTEIN KINASE 22 695 - -
Tpr7g4257 701 SUPERFAMILY Protein kinase-like (PK-like) 152 443 IPR011009 -
Tpr7g4257 701 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4257 701 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Tpr7g4257 701 SMART serkin_6 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4257 701 MobiDBLite consensus disorder prediction 40 63 - -
Tpr7g4257 701 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Tpr7g4257 701 MobiDBLite consensus disorder prediction 461 491 - -
Tpr7g4257 701 PANTHER CYCLIN-DEPENDENT KINASE 22 695 - -
Tpr7g4257 701 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4257 701 MobiDBLite consensus disorder prediction 584 659 - -
Tpr7g4257 701 MobiDBLite consensus disorder prediction 33 63 - -
Tpr7g4257 701 MobiDBLite consensus disorder prediction 593 631 - -
Tpr7g4257 701 MobiDBLite consensus disorder prediction 461 497 - -
Tpr7g4257 701 CDD STKc_CDK9_like 158 442 - -
Tpr7g4257 701 Gene3D Transferase(Phosphotransferase) domain 1 241 479 - -
Tpr7g4257 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4257 Tpr-Chr7 51525483 51530446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4257 150 485 Core Cell Cycle Gene Families AT5G10270 48.295 1.40e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr7g4257 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4257 - K08819 gmx:100775462 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4257 7 51525483 51530446 Tpr7g4257 7 51525483 51530446 ECH
Tpr7g4257 7 51525483 51530446 Tpr7g4257 7 51525483 51530446 PCT