Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4253 ATGGCTTCAGGACCATCAATTCACGGTAACTACATCTCCGAGGGACATAATTTGGGTTCCGATGATGTTTTTTGTTCATACGATGATTATACCAACGAGGGTTCTTCTTGTGCCACTCACATCGATTCTAGTAAGGATTTTCACATTTCAAGGATGGCAAAAACTTCAACATTTCCTGCTACTGTCATTAATTCACCTGAAGGTTCGTTAAGCCAAGATGTTATTGCAACAACTGTTGAGAAGAGTATGAAAGCATGTACCGCCAACCTTATGCGGTTTCTTGAAGGAATTAGTTCAAGGCTATCACAATTGGAATTATATTGTTACAATCTTGATAAATCAATTGGAGAAATGAGATCTGAGTTAACTAGTGACCACGAGGAGGCAGATTTAAAACTCAAATCTCTTGACAAACACATGCAGGAAGTACACAGGTCACTACAAATTTTAAGAGACAAACAAGAGCTAGTTGAGACTCAGAAAGAATTAGCCGTACTTCAACTTGCTCGGAAAGGATCACATTCCTCAATCCACTCACAGTCAAATGAGGAGAAATTTTCCTCCCCAGCTTCCATAGAACAGAAAAGAACTGATAATGCATCTCGTACATCACCTGATCCACATAACCAGCAGCTAGCTCTTGCCCTTTCTCATCAAGTTGCATACCAGCAACCGCCTATACCCCCGTCATCTCGAGCTTCATCCCCAAATGTGACCCAAACCACGCAACAACCTCCTTATTACATGCTGCCCGCGCCTTCCCCCAACCCGCCAGTCACATCACAACTTCCTCAGAATCAGTATTTTCCTACTGATCCGCAGTATCGATATCATCATCCACCAACATCGTCTCAAGTAACCCAGTCCCTGACTGCGCAACAATTTTCTCAGTATCAGCAGCAGCCACAACAGCAATGGCCTCAACAGTTACCTCAGCAGGTACAACCTCTGCAACCACCCTCAATGAACTCTCAAATGAGACCTCCATCAGTAAATGCTTACGCTCCGTACCTTACAAGCCAAGCTTCAAGTCCACTTCCCACCGACACATTGCCGAACAGCATGCCAATTCAAAAGCCATATTCAGGGATTCCAACCCAAATCAAGGGACACTATCCATCCCAACCAGGTAATCCGTATGGAACTAGTGGGGTCCACAACACACCTCCTCCTGCGAGTGCATACGTGATGCATGAAAGTGAGGGTGGCAGAGTAAATTACCCTCCGCAACCTTCTCAATCTGCTCAAGGTGTATATCCTCCTCAAAGTGCTTCCGTTCAGAATCCTGCACTGCAGAATCTACCAGTGAGAAATCCTAGCCAGCCACAACTTGTCCGCAGCCACCCTTACAATGAGTTGATTGAGAATTTGGTGAGTATGGGAGTTAGAGGCGATCTTGTGGTAAGCATTATTCAGAGGTTGGAGGAAACTGGACAGCCTGTAAATTTTAACTCTGTACTTGACAGGTTGAATGTACATAGTTCATTGGGTCCCCAGAGGGGATGGTCAGGGTGA 1515 0.4488 MASGPSIHGNYISEGHNLGSDDVFCSYDDYTNEGSSCATHIDSSKDFHISRMAKTSTFPATVINSPEGSLSQDVIATTVEKSMKACTANLMRFLEGISSRLSQLELYCYNLDKSIGEMRSELTSDHEEADLKLKSLDKHMQEVHRSLQILRDKQELVETQKELAVLQLARKGSHSSIHSQSNEEKFSSPASIEQKRTDNASRTSPDPHNQQLALALSHQVAYQQPPIPPSSRASSPNVTQTTQQPPYYMLPAPSPNPPVTSQLPQNQYFPTDPQYRYHHPPTSSQVTQSLTAQQFSQYQQQPQQQWPQQLPQQVQPLQPPSMNSQMRPPSVNAYAPYLTSQASSPLPTDTLPNSMPIQKPYSGIPTQIKGHYPSQPGNPYGTSGVHNTPPPASAYVMHESEGGRVNYPPQPSQSAQGVYPPQSASVQNPALQNLPVRNPSQPQLVRSHPYNELIENLVSMGVRGDLVVSIIQRLEETGQPVNFNSVLDRLNVHSSLGPQRGWSG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4253 504 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 367 - -
Tpr7g4253 504 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 365 502 - -
Tpr7g4253 504 MobiDBLite consensus disorder prediction 280 326 - -
Tpr7g4253 504 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 365 502 - -
Tpr7g4253 504 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 367 - -
Tpr7g4253 504 MobiDBLite consensus disorder prediction 221 242 - -
Tpr7g4253 504 MobiDBLite consensus disorder prediction 172 209 - -
Tpr7g4253 504 MobiDBLite consensus disorder prediction 171 209 - -
Tpr7g4253 504 Pfam UBA-like domain (DUF1421) 450 494 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4253 Tpr-Chr7 51479860 51483196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4253 64 194 Trihelix Transcription Factor Family AT5G14540 35.115 9.23e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4253 - - aip:107610486 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4253 7 51479860 51483196 Tpr7g4253 7 51479860 51483196 ECH