Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4245 ATGTCTTTCCCAATGCTTCAACTTAAGCAACTTCTCATTCTTCTCCACACTGTAACCATAATTATATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCAACAAACATTGTGATATATGGAAATGCAACCATTCAAAATTCCATTCTCACTCTCACTAATGGCACTTATTTCTCTATAGGCCGTGCTTTTTACCCTAAAAAAGTATCAACCAAATCACCCAACTCTTCCACTCTTCTCCCCTTTGCTACTTCCTTCATTTTCTCAGTTGCCCCCATCAAAAAAGTTCTCCCAGGACATGGCTTTGCCTTCATATTCACACCTTCAAGAGGTCTAAATGGAACAATATCAAACGAATATATCGGTCTCTTCAATTTGACCAATGAAGGCAATCTTAACAACCATGTTTTTGGAGTTGAATTCGATATAGTTAGAAACGAAGAATTCAACGATACAAATGGTAATCATATTGGTATCGACGTAAACTCGCTAAAATCCTTATCTTCACATGAGGCTGGCTACTGGAGTGGAAAATATGACAATGAGTTTAAGGTGTTGAACATTAAAAGTGGTGAAAATTATCAAGTTTGGATTGAATTTATGCACTCTAAGATAAACGTTACTATGGCTCCGGCAGGACAAAATAGGCCTCAAGTTCCTCTCATCAGTATGAATGTTAACCTTACTGGGGTTCTTGTGGATGAAACATACGTTGGATTCAGTGCAGCCACAGGGCAAATAGTAGACAGTAGTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATAGGTGATGCTTTAGTGACACACAACTTGCCGACATTTATTCCTCATAAGGGATGGTTTTCTAGAGCAAAAGCTTTACTTTTAGTGGCCACCGGTGTTGTTTTTGTCTTAATAATCATCTGTTGCAGTAGTATAGTTGTTTTCATTCTATATAGGGGGGGAAAGGGAGAGGAAGAAATTGAAGCGTGGGAACTAGAGTATTGGCCACATAGAATTGGTTTCCAAGAGATTCATGCAGCAACAAGAGGATTCTCTGAAGAGAATGTGGTTGCTATAGGAGGGAACAAAAGTGTGTATAAAGGGATTTTGCAAGGAGTTGAAGTCGCGGTTAAGAGAATCCCTCAAGAAAGCAAAGGAATGAGAGAGTTTTTGGCAGAGGTTTCAAGCCTAGGAAGATTGAAACATAGAAGTTTAGTAGGATTTAGAGGTTGGTGCAAAGGAGAGAATGGAAACTTGATTCTCGTTTATGACTTCATGAATAATGGCAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGATGGCATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCGCAGGGATTCAATACCTGCACGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGACATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCCAGATTGGGGGATTTTGGATTGGCTCTTATGCATGAGCATCATGGACAAGTGGCTAGTACAACGAAAGTACTAGGGACATTAGGATACATTGCTCCAGAAGTTATTCGGACAGGAAGAGCGTCGACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAATTTGCGGGCGAAGACCTATTGAAGAAAATAAACCAGGACTAGTTGAATGGGTGGAGTCCCTAATGGTTGTTGGACAATTGCACAATGCTATTGATGAAAGGTTGAAGGCTAAAGGAGGATACCCTGCTGAGGAAGCTGAGAGATTACTTCATTTGGGTTTGTTGTGTTCAAATTCAAACCCTAGTGTTAGACCAATAATGAGGCAGGTTGTGAAAATGTTGGAGGGAGAAATGTATAACACTGAATCTGATGAAGAAAATATGGAGAAAGGTTTACTTCGAAGAATAAAATCAGCTGCAATGTGGACTAGAACTGAAAGTGGACTTCGATACAAAAATCACCCTACTTTTGAAGATATTAAAATGTTTAGTTATAACTCTGAGAGAACTACAAGTAGCTCAAGTTCCATTCCACAAGGATCATAA 2064 0.3886 MSFPMLQLKQLLILLHTVTIIICCVSTTEFVYNTNFNSTNIVIYGNATIQNSILTLTNGTYFSIGRAFYPKKVSTKSPNSSTLLPFATSFIFSVAPIKKVLPGHGFAFIFTPSRGLNGTISNEYIGLFNLTNEGNLNNHVFGVEFDIVRNEEFNDTNGNHIGIDVNSLKSLSSHEAGYWSGKYDNEFKVLNIKSGENYQVWIEFMHSKINVTMAPAGQNRPQVPLISMNVNLTGVLVDETYVGFSAATGQIVDSSKILAWSFSNTNFSIGDALVTHNLPTFIPHKGWFSRAKALLLVATGVVFVLIIICCSSIVVFILYRGGKGEEEIEAWELEYWPHRIGFQEIHAATRGFSEENVVAIGGNKSVYKGILQGVEVAVKRIPQESKGMREFLAEVSSLGRLKHRSLVGFRGWCKGENGNLILVYDFMNNGSLDKWIFECEEGKMMAWEERIQVLKNVAAGIQYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIEENKPGLVEWVESLMVVGQLHNAIDERLKAKGGYPAEEAERLLHLGLLCSNSNPSVRPIMRQVVKMLEGEMYNTESDEENMEKGLLRRIKSAAMWTRTESGLRYKNHPTFEDIKMFSYNSERTTSSSSSIPQGS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4245 687 PANTHER LECTIN RECEPTOR KINASE 5 678 - -
Tpr7g4245 687 PANTHER - 5 678 - -
Tpr7g4245 687 ProSiteProfiles Protein kinase domain profile. 352 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4245 687 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Tpr7g4245 687 Gene3D Transferase(Phosphotransferase) domain 1 427 645 - -
Tpr7g4245 687 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246
Tpr7g4245 687 Pfam Protein kinase domain 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4245 687 Gene3D - 26 274 - -
Tpr7g4245 687 Gene3D Phosphorylase Kinase; domain 1 322 426 - -
Tpr7g4245 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Tpr7g4245 687 CDD STKc_IRAK 361 622 - -
Tpr7g4245 687 SMART serkin_6 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4245 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 265 IPR013320 -
Tpr7g4245 687 SUPERFAMILY Protein kinase-like (PK-like) 331 622 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4245 Tpr-Chr7 51397233 51399580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4245 25 568 Receptor kinase-like Gene Family AT4G04960 56.530 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr7g4245 Pkinase 4.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4245 - - mtr:MTR_2g090410 1028.08