Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4240 ATGGCTGCAGCTAAGAACAGTGGAAAATTCAATAAAGATTTTGGTGATGAAACTCACAACAATCGTAACAAGGTTATACAAATTGGTGAAAGCCAAGTTAATTGGGAGATTGAAAAAGGAAAAAGTGTTGAATCAAGCTCTTCTCAAAGGTATCATTGGAAGCCCGTTTTTGATGAAGCTTCTATTTCACATAATAGACCTTTCAAGAAAAGTAAAAGCCCTGAACGTGAAAATCAAAATCAAAATCAATTTTCACCTTTTTCTGTTCCTTCTTCAGCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCAAGACTTGTTTTTCCTTTTGCTTTTGATAATACTTCACAACAATTTGGTCCCAACAACAATTTACCTTTTTACCCTTATCCACCACCTACACAAAACCAAAACCAAAACCAGCAACAAATGATATCTTTTGGGTCACAATCACAACAACAACAACAGAACAATATTGTTTCATATCCACCAATTTTGTCTCAACAACAACAGCAGCAACATCATCAACAACTTCTTCAATATTGGAGTGATGCATTGAATCTAAGTCCAAGAGGAAGAATGTTGATGATGATGAACAATAACAATAGGTACTTGGGGCAATATGGTAATAATAATGGACCAATGTTTAGGCCTCAAGTTCAACCTATAAGTACTACAAAACTCTATAGAGGAGTTAGACAAAGACATTGGGGAAAATGGGTAGCTGAAATTCGTCTACCTCGAAATAGAACTCGTCTTTGGTTAGGGACATTTGATACCGCCGAAGATGCTGCTTTAGCCTATGATCGCGAGGCGTTCAAGTTAAGAGGAGAAAATGCAAGGCTCAATTTTCCTGAACTTTTTCTCAACAAAGATAAAGATAAAGATAAAGAAAAAGAAAAAGAAAAATCAGCACCTTCATCACCACCTCCAACATCAACAAATGCAGATTCATCTGTTACTTCTTCGACAAGTAACACCGTGACAAAGCAGCCTGAGCCTCCACCGATGCAGACACTTCCAATAGAAGAGTCTAATGAGAATGACTCCGGAATTGGATCAAGTGAAGCTACGGTGAGCGAAGGTGGAGAAGGCGTTTCGCAGTCACAAGAATTGGTTTGGAGTGAAATGTCAGCATGGTTTAATGCTATTCCGGCGGCTTGGGGTCCAGGCAGTCCTGTTTGGGATGATAATCTTTTTTCACAGTCACAAAATCCTTTTTCCAATCTTAACCAACATGAAGAATTCAATGATTTTGATCCTCAGATAGGGTCAGGTTCTTCTTCCATTAGGCCTTTCTTTTGGAATCATGATCAAACTTGA 1320 0.3803 MAAAKNSGKFNKDFGDETHNNRNKVIQIGESQVNWEIEKGKSVESSSSQRYHWKPVFDEASISHNRPFKKSKSPERENQNQNQFSPFSVPSSASSSSSSSSSSRLVFPFAFDNTSQQFGPNNNLPFYPYPPPTQNQNQNQQQMISFGSQSQQQQQNNIVSYPPILSQQQQQQHHQQLLQYWSDALNLSPRGRMLMMMNNNNRYLGQYGNNNGPMFRPQVQPISTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKDKDKEKEKEKSAPSSPPPTSTNADSSVTSSTSNTVTKQPEPPPMQTLPIEESNENDSGIGSSEATVSEGGEGVSQSQELVWSEMSAWFNAIPAAWGPGSPVWDDNLFSQSQNPFSNLNQHEEFNDFDPQIGSGSSSIRPFFWNHDQT* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4240 439 MobiDBLite consensus disorder prediction 286 369 - -
Tpr7g4240 439 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 434 - -
Tpr7g4240 439 Gene3D AP2/ERF domain 227 285 IPR036955 GO:0003700|GO:0006355
Tpr7g4240 439 CDD AP2 226 286 IPR001471 GO:0003700|GO:0006355
Tpr7g4240 439 MobiDBLite consensus disorder prediction 77 91 - -
Tpr7g4240 439 MobiDBLite consensus disorder prediction 57 76 - -
Tpr7g4240 439 SMART rav1_2 227 290 IPR001471 GO:0003700|GO:0006355
Tpr7g4240 439 PRINTS Ethylene responsive element binding protein signature 228 239 IPR001471 GO:0003700|GO:0006355
Tpr7g4240 439 PRINTS Ethylene responsive element binding protein signature 250 266 IPR001471 GO:0003700|GO:0006355
Tpr7g4240 439 MobiDBLite consensus disorder prediction 305 332 - -
Tpr7g4240 439 MobiDBLite consensus disorder prediction 340 369 - -
Tpr7g4240 439 MobiDBLite consensus disorder prediction 286 304 - -
Tpr7g4240 439 SUPERFAMILY DNA-binding domain 227 285 IPR016177 GO:0003677
Tpr7g4240 439 MobiDBLite consensus disorder prediction 134 155 - -
Tpr7g4240 439 MobiDBLite consensus disorder prediction 1 91 - -
Tpr7g4240 439 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 434 - -
Tpr7g4240 439 MobiDBLite consensus disorder prediction 38 52 - -
Tpr7g4240 439 ProSiteProfiles AP2/ERF domain profile. 227 284 IPR001471 GO:0003700|GO:0006355
Tpr7g4240 439 Pfam AP2 domain 228 276 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4240 Tpr-Chr7 51361650 51363979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4240 1 429 AP2-EREBP Transcription Factor Family AT2G20880 38.106 1.04e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr7g4240 AP2 3.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4240 - - lang:109337172 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4240 7 51361650 51363979 Tpr7g4240 7 51361650 51363979 ECH