Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4235 ATGGGGTGCTGTTTATCGACAAGTAGTAGAAGTACTGATGACGCGGGGTCTTCGTCTTGTCTAGAAATCGGATTGTGTGGTCAAAAGAAAGGGAGGAGAACATTCTCTGATCATGTTGTCTCTTTGCAAAAGTTAACTTCCTTACCAAACAGAATATTCAGTAACGGGAAGAGCCGGTCTTCTTGTATATTTACGCAGCAAGGTCGAAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCGTATCAGAAGATGCGATCTTTTGTGGTGTATTTGATGGCCATGGTCCGTATGGTCACCTTGTCGCGCGCAAAGTTAGGGATGCCTTACCGATAAAATTGCTTTCATTTTTGGATTCATCTGAGTCAAGACGAAGTAAAGCTAGTTTCAAAAAGGAAATAAAGCCGGAAAGTGGAGAGGCGGAGAACGATTTCTCTGCTGAGGAGGAGATGAGTACTATGTGGAGAGAAGCTTTCATGAAGGCATACAAAGCTATGGATAAAGAGCTGAAGTCCCATGCAAATTTGGATTGTTTCTGTAGTGGAAGTACATCTGTGACTATAGTGAAACAGGGTTCAAATTTGTTCATGGGAAATATTGGTGATTCAAGAGCAATCATGGGATCTAAGGATAGCAATGACTCGATGGTGGCGATTCAGCTGACCGTTGATTTGAAACCTGATTTGCCAAGAGAAGCAGAAAGAATTAAGAAGTGCAAAGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAGGGTGTGGTTACCTTATGATGATGCACCAGGATTAGCAATGGCTAGAGCATTCGGAGATTTTTGCTTGAAGGAGTATGGTGTCATTTCTATACCTGAATTTACGCACCGGCTTCTCACAGACAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGATCTGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCATCAGCACCGAATCGATCATCAGCAGCGAGGGTTATAGTGGAATCTGCCGCACGAGAGTGGAAACATAAATATCCGACTTCAAAAATGGACGACTGTGCTGTTGTGTGCCTATTTTTGGATGGGAAAATCAACTCAGAAGAATCTGATTGTGATGAACAATGCTATTCTTCCGCCACCATCCAGAATAACAACGATTTGAGTAATCCAGTTGAGTTGGACGAAGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTACACTGTTAGATCCTCAGAAGAAATTGAGAAATGTGTAGGAGGAGAATCTGTTGATGTTGAAGATGGAACATCAACAGCTGAAGATCAAAACTGGTTAGCTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAACTTCCTAGATTTTCTGAAGAAAAGCCTAACTCTTGA 1395 0.4265 MGCCLSTSSRSTDDAGSSSCLEIGLCGQKKGRRTFSDHVVSLQKLTSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFVSEDAIFCGVFDGHGPYGHLVARKVRDALPIKLLSFLDSSESRRSKASFKKEIKPESGEAENDFSAEEEMSTMWREAFMKAYKAMDKELKSHANLDCFCSGSTSVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISIPEFTHRLLTDKDQFIVLASDGIWDVLSNEEVVEIVSSAPNRSSAARVIVESAAREWKHKYPTSKMDDCAVVCLFLDGKINSEESDCDEQCYSSATIQNNNDLSNPVELDEGQKSEPSLRRNYTVRSSEEIEKCVGGESVDVEDGTSTAEDQNWLALEGVTRVNSLVQLPRFSEEKPNS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4235 464 SMART PP2C_4 49 359 IPR001932 -
Tpr7g4235 464 Gene3D - 50 363 IPR036457 -
Tpr7g4235 464 ProSiteProfiles PPM-type phosphatase domain profile. 60 361 IPR001932 -
Tpr7g4235 464 MobiDBLite consensus disorder prediction 387 407 - -
Tpr7g4235 464 Pfam Protein phosphatase 2C 109 338 IPR001932 -
Tpr7g4235 464 MobiDBLite consensus disorder prediction 130 144 - -
Tpr7g4235 464 SUPERFAMILY PP2C-like 49 363 IPR036457 -
Tpr7g4235 464 MobiDBLite consensus disorder prediction 130 149 - -
Tpr7g4235 464 PANTHER ALPHABET, ISOFORM E-RELATED 1 452 - -
Tpr7g4235 464 CDD PP2Cc 59 361 IPR001932 -
Tpr7g4235 464 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4235 Tpr-Chr7 51294279 51297683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4235 1 464 PP2C-type Phosphatase Gene Family AT1G03590 65.957 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4235 - - gmx:100777448 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4235 7 51294279 51297683 Tpr7g4235 7 51294279 51297683 ECH
Tpr7g4235 7 51294279 51297683 Tpr7g4235 7 51294279 51297683 PCT