Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4224 ATGCCGAAGAACAAAGGAAAGGGAGGAAAGAATCGCAAGAGAGGAAAGAACGAAGCCGATGACGAGAAACGCGAACTCGTATTCAAAGAAGATGGTCAAGAATATGCTCAGGTTCTTCGTATGCTTGGTAACGGTCGATGTGAAGCAATGTGTCTGGACAATAACGGAACCAAACGACTCTGTCATATCCGTGGTAAGTTGCACAAAAAAGTTTGGATTGCTTCCGGCGATATAATTCTCGTCGGTCTCCGTGATTATCAAGATGATAAGGCTGATGTTATTCTGAAATTCATGCCTGATGAAGCTAGGCTTCTTAAGGCTTATGGTGAGCTTCCTGATAATATGAAACTTTATGTCGATTGCGGTGGTGGTGCTGATGATGATGAAGAGAATGATATTGATTGCATTGAGTTTGAGAATGATGATATTGATAAGATTTAA 441 0.4104 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCLDNNGTKRLCHIRGKLHKKVWIASGDIILVGLRDYQDDKADVILKFMPDEARLLKAYGELPDNMKLYVDCGGGADDDEENDIDCIEFENDDIDKI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4224 146 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g4224 146 ProSiteProfiles S1 domain IF1 type profile. 22 98 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tpr7g4224 146 Pfam Translation initiation factor 1A / IF-1 32 95 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tpr7g4224 146 PANTHER EIF-1A 1 146 IPR001253 GO:0003743|GO:0006413
Tpr7g4224 146 SUPERFAMILY Nucleic acid-binding proteins 2 145 IPR012340 -
Tpr7g4224 146 Gene3D - 2 146 IPR012340 -
Tpr7g4224 146 SMART eIF1neu4 28 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4224 146 Hamap Translation initiation factor 1A [eif1a]. 16 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4224 146 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 112 IPR001253 GO:0003743|GO:0006413
Tpr7g4224 146 CDD S1_IF1A 33 111 IPR001253 GO:0003743|GO:0006413
Tpr7g4224 146 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4224 Tpr-Chr7 51235864 51236304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4224 1 146 Eukaryotic Initiation Factors Gene Family AT2G04520 80.272 1.41e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4224 K03236 - sly:101248917 224.172