Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4198 ATGCTTAGTTACTTTTCCTTTGATTTTCATTCAAGTTATTCAGAAATTTCCTTTGAAAAAGTATATAAATTGCTTCATTACAATAGCTTCTCATCACATCCTTCAAATTTCATAGAATTCATGGCAGAGCTTATAGGAACAAAACATAAGCTTATTGAACAAACTATGATTTTTCCATCATCAACAACAAAAATTTGTCTTCCTCTTACATTTCTTGACTTACCTTTAGCAGGTCCAATCTATGTTCGACGCCAATTCTTCTATCGATTTCCTCAGTCGACAAACCATTTTTGCCAAACAACTTTTCCATCTCTCAAACAATCACTATCTCTCACTCTTCAACATTTCTTCCCTCTTGCTGGAAATCTCATCTCTCCACCAACACCAAACAAACCCTTCATTCTCTGCACTGAAAAAGACTCTGTCCCTTTTACCATCGTCGAATCTTCCGAAGATTTCAACCATCTTTCAGCCAATTACAAACTGAAAAATATCAAAGACTTTAACCACCTTGTTCCAAAATTAACACATAAAACAATCCACGATGACAATGACAATGACAATGACAATGAAGATAACAACACCTTTGTCTTTCCTTTGTTGTCTTTGCAAGCTTCTGTTTTTCCTAACAATGGTCTTTGCATTGCAATCACATATTGTCATGTTATGGATGATAGTTGTTGTAGTCATTTCATGAAGACTTGGTCTTTAATCCATAAAAAATGTGAAAGTGTTGACTTAAAGTCAACGCCTTGTTTTGATAGAGATATTTTGAGGGACCCAAAAGGGTTAATTGAGAATGTTTTCTTAAGAGACTATTTTGAAGAAAGAAAAACATGGAAGAATAAACTCATTGGTCAAACTCAAACTCAAACTATTGAAGAACATCATGAAGTGGTTGAAGATTATTTTAAAGCAACTATTGTTTTTGGAAAAGAAGAAATTGAGAGAATGAAAAAATGGGCACTTAGTCAATGGAATAAAAATGATCATGAAATTATAAAGCCACAATTTTTATCTAAATTTGTTGTAACTTGTGGTTTTGTTTGGGCTAATTTGGTTAAAACAAGATATAGAAATGATAATAATGATGAAAAAGAAGAGTTTTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGGTACAAAATACCAGAAGGGTATTTTGGGAATTGTTTAACACTATGTCATGCAACAGTGAAGAGAAAAGATATGAAGGGTGAAGATGGTTTTGTGAAAGCTGTTAAGGTAATTGAAAGGGCAATAAGTGAAATGAAAAATGAACCTTTTAAAAATGTTGAAGAATGGAGAGATACATTTAAGAATATGTTTGAATTTGGAAGTGTTTTGTTGGTGACAGGTTCACCTAAGTTTAATGTTTATGAGACTGATTTTGGATTTGGAAAACCTGTTAAAGTTGAAATGGTGCATTCTTTTAAGTGTATGTCTATTGCTGAAAGTGGAGATAGAGATGGTGGAATTGAGGTTGGGTTGGTATTCAAAAGTGGAGAATTTGAATATTTCTGTTCTGTTATTGAACAAGGACTTGAAGCTTTTAAATCCTAA 1566 0.3276 MLSYFSFDFHSSYSEISFEKVYKLLHYNSFSSHPSNFIEFMAELIGTKHKLIEQTMIFPSSTTKICLPLTFLDLPLAGPIYVRRQFFYRFPQSTNHFCQTTFPSLKQSLSLTLQHFFPLAGNLISPPTPNKPFILCTEKDSVPFTIVESSEDFNHLSANYKLKNIKDFNHLVPKLTHKTIHDDNDNDNDNEDNNTFVFPLLSLQASVFPNNGLCIAITYCHVMDDSCCSHFMKTWSLIHKKCESVDLKSTPCFDRDILRDPKGLIENVFLRDYFEERKTWKNKLIGQTQTQTIEEHHEVVEDYFKATIVFGKEEIERMKKWALSQWNKNDHEIIKPQFLSKFVVTCGFVWANLVKTRYRNDNNDEKEEFFRFAGDCRDRLGYKIPEGYFGNCLTLCHATVKRKDMKGEDGFVKAVKVIERAISEMKNEPFKNVEEWRDTFKNMFEFGSVLLVTGSPKFNVYETDFGFGKPVKVEMVHSFKCMSIAESGDRDGGIEVGLVFKSGEFEYFCSVIEQGLEAFKS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4198 521 PANTHER - 47 521 - -
Tpr7g4198 521 Gene3D - 300 519 IPR023213 -
Tpr7g4198 521 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 47 521 - -
Tpr7g4198 521 Pfam Transferase family 51 509 - -
Tpr7g4198 521 Gene3D - 49 284 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4198 Tpr-Chr7 51064708 51066578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4198 48 508 Monolignol Biosynthesis Gene Families AT5G48930 23.188 9.47e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4198 - - gmx:100813271 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4198 7 51064708 51066578 Tpr7g4198 7 51064708 51066578 ECH