Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4191 ATGATGAGAACTTCTTTTTGTGAAAAAAATGGATTGAGAAAAGGCACTTGGACAACTGAGGAAGACAAAAAGTTGATTGCTTATGTTACTAGGTATGGTTGCTGGAATTGGCGCCAACTACCTAAATTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGTAGATTAAGGTGGTTGAACTATCTAAAGCCAGGTATCAAAAGAGGGAACTTTAGTCAACAAGAAGAAGAAACTATCATTAAACTTCACCAAAAATTGGGTAATAGGTGGATCATAATTGCTGCAAATTTACCAGGGAGAACAGATAACGAGATAAAGAATTACTGGCACACTATCTTGAAAAAACGTGTTATGAAAAATAGTATGTCAGACGCTAAATGTGGAACAAGAAAAGCCAAAGTTTCAGAGTCAAATGATCACCCTACAATGGAAGCTGAAGCCAGTAAAATTGATTGTGTATTAGAGAACAATAGTAGTCACAATATCTCAAATCCACTTTCTTCAAAATCATCTTCAAGTGAATTTTCTTGCATAACAATGGATAGTGCAGCTACCAAAATATCATATGAAAATTCTCTTTTTGATGACAATGACATTCCTTTTATGAATGAATACATGGAAGCTGTGAGTGAAAATTTCTGGACAGAGCCATATATGATAGAGAGTACTTATGTCCATCCAAGTGAAGAAGCTATATTACTTCCTGCAGGGTGTGAACATGAATACTTTAGTCCTAAGTACGATATAGAACTTTGGAGCAGTGTAGAATAA 768 0.3542 MMRTSFCEKNGLRKGTWTTEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLKPGIKRGNFSQQEEETIIKLHQKLGNRWIIIAANLPGRTDNEIKNYWHTILKKRVMKNSMSDAKCGTRKAKVSESNDHPTMEAEASKIDCVLENNSSHNISNPLSSKSSSSEFSCITMDSAATKISYENSLFDDNDIPFMNEYMEAVSENFWTEPYMIESTYVHPSEEAILLPAGCEHEYFSPKYDIELWSSVE* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4191 255 CDD SANT 69 112 IPR001005 -
Tpr7g4191 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr7g4191 255 SMART sant 66 114 IPR001005 -
Tpr7g4191 255 SMART sant 13 63 IPR001005 -
Tpr7g4191 255 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr7g4191 255 CDD SANT 16 61 IPR001005 -
Tpr7g4191 255 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Tpr7g4191 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Tpr7g4191 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Tpr7g4191 255 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Tpr7g4191 255 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Tpr7g4191 255 Gene3D - 14 66 - -
Tpr7g4191 255 Gene3D - 69 141 - -
Tpr7g4191 255 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr7g4191 255 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4191 Tpr-Chr7 51007772 51011124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4191 1 119 MYB Transcription Factor Family AT2G31180 68.908 2.19e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g4191 Myb_DNA-binding 6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4191 K09422 - mtr:MTR_2g089420 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4191 7 51007772 51011124 Tpr7g4191 7 51007772 51011124 ECH
Tpr7g4191 7 51007772 51011124 Tpr7g4191 7 51007772 51011124 PCT
Tpr4g1362 4 13154395 13156180 Tpr7g4191 7 51007772 51011124 PCT