Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4188 ATGATGAAACCATGGTTCTATCTTTCTTTTTTAATGTTCTTCTTTTCTTTAAACTCATATCCTTCCCTTGCAGCTATAACTACAATCTCTGCAAACCAATCTATCTCTGGTGATCAAACTCTTATCTCTAAAGGAGGAATCTTTGAACTTGGTTTCTTCAAACCAGGTAATTCTTCTAACTACTATATAGGCATATGGTACAAAAAAATCATTCAGCAAACAATTGTTTGGGTGGCCAACAGAGACAATCCTGTCTCTGACAAAAACACTGCAATCTTAGAAATTTCAGCTGGTAATTTAGTTCTATTAAATGAGTTTTCAAAACAAGTTTGGTCCACAAACACGAGTTTTCCTAAATCAGATACTGTCGTAGCTGTCCTCCTAGATACCGGCAATCTGGTTTTAAGAAATAGGCCTAATGATGAGGTATCGAAGCCTCTATGGCAGAGTTTTGATCATCCAACAGATACTTGGCTTCCTGGTGGAAAAATTAAGCTAGACACTAAAACAAAGAAGCCTCAGTATCTTACTTCATGGAAGAATAAGAAAGATCCTGCAACAGGTCTTTTCTCTTTGGAATTAGACCCGAAAGGAACAACTTCATATCTTATTCTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGACCTTGGAATGGACATATTTTCAGTTTGGTTCCTGAGATGAGGTCAAATTATATCTACGATTTTTCGTTTGTGTCGAACGAGAATGAAAGCTACTTCACTTATTCTTTGTATAACCCTTCCATTATATCGCGGTTTGTGATGGATATCTCAGGGCAGATTAAGCAATTGTCATGGTTGGAAGGTATCAATGAGTGGAACCTGTTTTGGTCGCAGCCAAGAACACAGTGTGAGGTTTATGCTTTCTGTGGTGCGTTTGGGAGCTGTACTGAGAACTCGAAGCCGTATTGTAATTGTTTGAGTGGTTTTGAGCCAAAGTCGCAATCTGATTGGGATCTGGAGGATCACTCAGGTGGGTGTAAGAGAAAAACAACGTTGCAATGCGAGAGTTCTGATCACTCTAACAGAGTAAAGGAGAGGTTCCGTGCAATCCCCAACATGGCATTGCCTAAACATGCAAAATCTGTGAATTCAGGGAATGCAGTAGAATGTGAATCAATGTGCTTGAAAAACTGCTCTTGTTCTGCTTATTCGTATGATGGTAATGAGTGTTCAATTTGGGTTGAAGACCTACTGAATCTGCAACAATTTCCTTCGGATGACAGTAGCGGAAAAACATTGTATCTAAAACTTGCAGCATCAGAATTCAGTGATGCTAAAAACAAAAATGGGGTGATTATCGGTGTTGTAGCTGGTGCGGTTGTTGGGATAGGGATTCTCTTGGCCCTTCTTCTGTTTGTCATACTTAGGCGAAGAAAGCGAACAGTTGGAACAGGTAAGCCCGTGGAGGGTTCATTGGTGGCATTTGGGTACAGAGATATGCAAAATGCAACTAAGAATTTTTCTGAGAAGTTGGGAGGAGGAGGATTTGGTTCTGTTTTCAAAGGAACATTGGCTGATTCGAGTGTGGTGGCAGTGAAGAAGTTGGAAAGTGTTAGCCAAGGAGAGAAGCAGTTCAGAACAGAAGTGAGTACAATAGGGACAGTGCAACATGTTAATCTTGTTCGGCTCCGTGGATTCTGTTCAGAAGGTACTAAAAGGATGCTGGTTTATGATTACATGCCAAACGGTTCCTTGGATTTCCATTTGTTCATGAAAAAGGATTCTTCTAAGGTGTTGGACTGGAAAATGAGATACCAAATTGCTCTTGGAATTGCAAGGGGATTAACTTACCTCCACGAGAAGTGCCGAGACTGCATCATACACTGTGATGTAAAGCCTGAAAATATTCTCCTAGACTCCGATTTTGTTCCGAAAGTTGCAGACTTTGGACTAGCTAAGCTAGTCGGGCGAGATTTCAGCAGGGTCCTAACAACCATGAGAGGAACAAGAGGCTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATTACAGCCAAAGCCGATGTTTACAGCTATGGAATGATGCTTTTCGAGGTTGTATCGGGTAGGAGGAACTCTGATCCATCAGAAGATGGCCAAGTTACTTTCTTTCCTACCGTAGCTGCAAAAGTAGTTATTGAAGGTGGCAGTGCGATCACCCTTTTGGACCCTAGATTGGATGGAAATGGCGACGTTGAAGAGGTTGCACGGATAATTAAAGTCGCTTCTTGGTGTGTCCAAGACAATGAAACTGAAAGGCCAACAATGGGTCAGGTAGTTCAAATTCTTGAGGGGATTTTGGAGGTGAATTTGCCTCCGATTCCAAGATCCCTTCAAATGTTTGTTGACAACCATGATGAGAACATGATTTTCTACACTGACTCTAGCTCAACACAAAGTTCACAGGTAAAGAGTAACATCTCAACAACTTCTCAGGCCAAAAGTAACATCTCATCAGTTAGCTCTAAGTCCTCAGTAGAAAATTAG 2493 0.4116 MMKPWFYLSFLMFFFSLNSYPSLAAITTISANQSISGDQTLISKGGIFELGFFKPGNSSNYYIGIWYKKIIQQTIVWVANRDNPVSDKNTAILEISAGNLVLLNEFSKQVWSTNTSFPKSDTVVAVLLDTGNLVLRNRPNDEVSKPLWQSFDHPTDTWLPGGKIKLDTKTKKPQYLTSWKNKKDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGHIFSLVPEMRSNYIYDFSFVSNENESYFTYSLYNPSIISRFVMDISGQIKQLSWLEGINEWNLFWSQPRTQCEVYAFCGAFGSCTENSKPYCNCLSGFEPKSQSDWDLEDHSGGCKRKTTLQCESSDHSNRVKERFRAIPNMALPKHAKSVNSGNAVECESMCLKNCSCSAYSYDGNECSIWVEDLLNLQQFPSDDSSGKTLYLKLAASEFSDAKNKNGVIIGVVAGAVVGIGILLALLLFVILRRRKRTVGTGKPVEGSLVAFGYRDMQNATKNFSEKLGGGGFGSVFKGTLADSSVVAVKKLESVSQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKRMLVYDYMPNGSLDFHLFMKKDSSKVLDWKMRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILLDSDFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEVVSGRRNSDPSEDGQVTFFPTVAAKVVIEGGSAITLLDPRLDGNGDVEEVARIIKVASWCVQDNETERPTMGQVVQILEGILEVNLPPIPRSLQMFVDNHDENMIFYTDSSSTQSSQVKSNISTTSQAKSNISSVSSKSSVEN* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4188 830 PIRSF SRK 1 819 IPR024171 GO:0004674
Tpr7g4188 830 Gene3D Transferase(Phosphotransferase) domain 1 569 773 - -
Tpr7g4188 830 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Tpr7g4188 830 Pfam PAN-like domain 352 408 IPR003609 -
Tpr7g4188 830 SUPERFAMILY Protein kinase-like (PK-like) 480 803 IPR011009 -
Tpr7g4188 830 Gene3D - 23 152 IPR036426 -
Tpr7g4188 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Tpr7g4188 830 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Tpr7g4188 830 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 796 - -
Tpr7g4188 830 ProSiteProfiles Protein kinase domain profile. 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4188 830 CDD STKc_IRAK 500 768 - -
Tpr7g4188 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 4 796 - -
Tpr7g4188 830 MobiDBLite consensus disorder prediction 803 830 - -
Tpr7g4188 830 Pfam D-mannose binding lectin 74 180 IPR001480 -
Tpr7g4188 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 219 IPR036426 -
Tpr7g4188 830 SMART blect_4 32 154 IPR001480 -
Tpr7g4188 830 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Tpr7g4188 830 Gene3D Phosphorylase Kinase; domain 1 462 568 - -
Tpr7g4188 830 CDD PAN_AP_plant 339 427 - -
Tpr7g4188 830 SMART serkin_6 494 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4188 830 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Tpr7g4188 830 Pfam Protein kinase domain 497 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4188 830 CDD B_lectin 32 154 IPR001480 -
Tpr7g4188 830 SMART ntp_6 351 426 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4188 Tpr-Chr7 50989317 50992054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4188 444 775 Receptor kinase-like Gene Family AT5G20050 42.077 1.57e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr7g4188 Pkinase 9.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4188 - - gmx:100782119 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4188 7 50989317 50992054 Tpr7g4188 7 50989317 50992054 ECH