Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4186 ATGAAGAAGAATTGTGAACTTTGCAAACTTCCGGCTAGAACTTTCTGTGAGTCAGACCAAGCTAGCTTATGCTGGGACTGCGATTCTAAGGTCCACGGTGCTAATTTCTTAGTTGAGAGACACACAAGAACTCTCCTCTGTCACGCTTGTCAATCTCCCACGCCGTGGAAAGCTTCCGGTTCTAGACTCGGTAACGCGCTTTCGTTGTGTGAAAGATGCGCCGGTGGAAGAAAAGTTGATTCCGCTCAACAAGATGAAGAGAGTGAAGGTGACAATGAGGATGATGTTGAAACTGATTCCGATGAGGAGGATTCTGATGAGGATGAGGATGATGTTGACGGTGATAATCAGGTTGTTCCTTGGTCTTCAACGGCGATGCCTCCGCCGGCGTCGAGTTCTTCCGGTAGTGAAGAGTCGGTTTGCAAGTGTAACGAGAACGATGAAGTTGTTTCGCAGTTAGTTACAGCAATTACCTTGAAACGACGTCGTGTGGATCATGATTTTCAGGATTCGGATTCAAAAAACTGGAAAAATCAACGGAGAGAGGAGGTTGATTTGTTAGGGTGTGTCGGAGAACCATCGTCAAAGGCGGCGATACGGCGTTATTGTGACGGAGATGGAACGGAGCATTCTCAGCCACACGATTGA 648 0.4738 MKKNCELCKLPARTFCESDQASLCWDCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGSRLGNALSLCERCAGGRKVDSAQQDEESEGDNEDDVETDSDEEDSDEDEDDVDGDNQVVPWSSTAMPPPASSSSGSEESVCKCNENDEVVSQLVTAITLKRRRVDHDFQDSDSKNWKNQRREEVDLLGCVGEPSSKAAIRRYCDGDGTEHSQPHD* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4186 215 MobiDBLite consensus disorder prediction 80 113 - -
Tpr7g4186 215 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Tpr7g4186 215 MobiDBLite consensus disorder prediction 86 113 - -
Tpr7g4186 215 PANTHER - 3 185 - -
Tpr7g4186 215 SMART bboxneu5 1 46 IPR000315 GO:0008270
Tpr7g4186 215 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 185 - -
Tpr7g4186 215 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4186 Tpr-Chr7 50967974 50969244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4186 1 130 C2C2-CO-like Transcription Factor Family AT4G27310 43.373 1.34e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g4186 zf-B_box 9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4186 - - mtr:MTR_2g089310 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4186 7 50967974 50969244 Tpr7g4186 7 50967974 50969244 ECH
Tpr7g4186 7 50967974 50969244 Tpr7g4186 7 50967974 50969244 PCT