Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4185 ATGACAAACATTGTTCTATTTTCACTTAATTTTTTGCTGCTATGCTTTCAACTATGTTCAGCTAGAAATACTTTGAACTTTGGCAACAATATATCTCAACAAGAGAGTCTTGTTTCAATTGGAAAAAAATTTCAACTTGGTTTTTTTTCACCAAATGAAAGTGGTAGCAACACAACTAGTCTTAAGAAATACTTGGGAATATGGTATCGCAATTTGGAAGAAAAAAACACAGTGGTATGGGTAGCCAACAGAAACAAGCCTATTGTCGATTCAGACGGAGTTTTTCAAATTGCTGAGGATGGAAATCTTGTAGTAGCAGATGCATCACAGAGTTATTGGTCCACAGAATTAGCAAAAGTTTCCTCATCAAGAAACAGGTTAGTGAAGCTCTTGGATTCTGGAAACCTAGTACTAATGGATGATGATGGTTACATGTTGTGGCAAAGCTTCCAACATCCAACAGATACATTTCTTCCTGGTATGAAAATGAACATAAATTTAACTTTGAGTTCTTGGAGAAGTGAGAATGATCCAGAAAGTGGAAGCTTCGCTTTTGAACAAGCGAAAAAAAGCTATAGAGTAAACAACCATTCACAACTTTACTGGGAATTTGATGGACAAAATTTAGATAAGATGTTTCACATAATTCTTTTCTTGTTGGAGAACACCACCACCTCACATTCCATCTACAGCAAGTTACTAAAGAAAAACATGACACAACAAATTTTTAATTATGATAAATCAAGGTTGGTGATGAATTCTAGTGGTGAGATACAATTTTGGAAGTGGGAGGATAACTTTCAATGGATTAAAATTTGGGGGCAGCCATCGGATATATGCGACATACATAACTATTGTGGTAACTTTAGCAGCTGCAGCAAAGATAATTGGATTCCATGTAAGTGTTTGCCAGGATTTCGTAGGTTGTCGGATGATGCTCCTCGTTACCAGCTTGGAGAACGGTTCCAAGGATGTGTTAGAAAATCGCAAACATCGTGTCTCCCAAAGGTCATGGCCACTGCCAACAATGAAATGATATTCATCAACTTAACAAAGATAAAAGTGGGAAATCCAGACATAGGATTGCAATCAGAATCAGAAGCAAATTGTCAATCTATGTGCCTTAACATGTGTTCTGTCTCTCGGTGCAATGCTTATTCGTATAATAATGCTACATATAGTGATCGTAGCAGCATCTTTTCATGTTGGATATGGACACGACAATTGCCTACACTTCAAGAGGATCAAGATGATGGTCGCGATCTTTCAATCCTAGTGAAGAGATCAGATATAGAATCAACTGCAAAATCGTGCGAACCTTGTGGCACATATATAATTCCTTATCCTCTAAGCACCGGGCCAAAATGTGGAGACCCTATGTACAACAAATTCAGTTGTAACTTATTGACAGGCCAGCTTAGTTTCATGTTGTCAGATGGAAAATCATATCGAGTTACCGTGATTGATGAAGGTGGTAGAAAGTTTTATATCCAAACGAATGATACAAATCGTTGTGGTGATTCCAGTTCCAGTAGTTATCAAACTAGTTCACCGTTTAGTGTGATTAATTGGTGTTCTAACGAAGATGAAATAGAGCTCGATTGGGCACCGGCTCCCGAACCACATTGTGATAAATATGTTGAATGCAAAAATTGGCCCCATTCCACATGCATTGCAAAAAATGGAGGAGAAACAAGGTGCTATTGTGATTCAAAATATTTGTGGAACGCCTCAAGTTTAACTTGTACCCGAGAATCATCAAGAAACCATTCAACCAATCGAATGCGATTGATTCTAGCAGTAATTTGTATAGTCATCATTATCCTAACATGTACAATGGTGTTTGCTTATGTACGGAGAAAGAAAATAGGCCACAAGCTCGATAAGGTGAGCATTCAAATTCAGGAGAGTTTGTACAACAGTGAAAAACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAATGATGGTGAAAGCATTGAAGTACCTTATTATACTTTTAGAAGCATTCAATTAGCTACAAATAATTTTTCAGATTCAAACAAGCTTGGACAAGGAGGTTATGGCCCTGTCTATAAGGGAAGGTTTCCTGGAGGCCAAGATATTGCTATAAAGAGGCTTTCAAGCGTTTCAACTCAAGGCTTACACGAATTTAAAAATGAGGTTGTTTTGATTGCGAAACTTCAACATCGAAATCTTGTTAGGCTTAGGGGCTATTGTGTTAAAGGAGACGAAAAAATCCTACTATATGAATACATGTCAAACAAGAGCCTGGACACATTTATATTTGATCGAACAAGAACTGTACTTTTGGATTGGAAATTGCGGTTTGACATTATTATAGGCATTGCCCGAGGGATGCTTTATCTCCATCAAGACTCGAGATTGAGAGTGATTCATAGAGACCTTAAAACGAGCAACATTCTTTTAGACGAGGAGATGATTCCAAAGATATCAGACTTTGGTCTTGCCAAAATATTTGGCGGAAAAGAGACTGAAGCAAGCACACAAAGAGTAATGGGAACCTACGGATATATGGCTCCAGAATATGCCTTGGATGGATTCTTTTCAATCAAATCAGATGTTTTTAGCTTTGGTATAGTCCTACTAGAGATTCTCAGTGGTAAAAAGAACACGGGATTCTTTCGGTCCCAACAAATTTCTAGCCTTTTGGGTTATGCATGGAGATTATGGACAGAGAATAAGTTGCTGGATTTAATGGACTCTGCTATTAGTGAAACTTGCAATAAGAATGAATTCATTAAGTGTGCTCATATTGGGCTCTTATGTGTACAAGATGAACCAGGTGATCGACCTACCATGTCAAATATTTTGACAATGCTTGACAGTGAAACTTCAATCATCCCAATTCCAACACAACCAACCTTTTTTATGACCAAACAACAATCATCTAGTTCTTCTTCTAGCAAACTAGAAATCAATATGCAATTTGATACTAGTTATCAACAAGGTCGCTAG 2985 0.3742 MTNIVLFSLNFLLLCFQLCSARNTLNFGNNISQQESLVSIGKKFQLGFFSPNESGSNTTSLKKYLGIWYRNLEEKNTVVWVANRNKPIVDSDGVFQIAEDGNLVVADASQSYWSTELAKVSSSRNRLVKLLDSGNLVLMDDDGYMLWQSFQHPTDTFLPGMKMNINLTLSSWRSENDPESGSFAFEQAKKSYRVNNHSQLYWEFDGQNLDKMFHIILFLLENTTTSHSIYSKLLKKNMTQQIFNYDKSRLVMNSSGEIQFWKWEDNFQWIKIWGQPSDICDIHNYCGNFSSCSKDNWIPCKCLPGFRRLSDDAPRYQLGERFQGCVRKSQTSCLPKVMATANNEMIFINLTKIKVGNPDIGLQSESEANCQSMCLNMCSVSRCNAYSYNNATYSDRSSIFSCWIWTRQLPTLQEDQDDGRDLSILVKRSDIESTAKSCEPCGTYIIPYPLSTGPKCGDPMYNKFSCNLLTGQLSFMLSDGKSYRVTVIDEGGRKFYIQTNDTNRCGDSSSSSYQTSSPFSVINWCSNEDEIELDWAPAPEPHCDKYVECKNWPHSTCIAKNGGETRCYCDSKYLWNASSLTCTRESSRNHSTNRMRLILAVICIVIIILTCTMVFAYVRRKKIGHKLDKVSIQIQESLYNSEKHVKGLIGLGSLEENDGESIEVPYYTFRSIQLATNNFSDSNKLGQGGYGPVYKGRFPGGQDIAIKRLSSVSTQGLHEFKNEVVLIAKLQHRNLVRLRGYCVKGDEKILLYEYMSNKSLDTFIFDRTRTVLLDWKLRFDIIIGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMIPKISDFGLAKIFGGKETEASTQRVMGTYGYMAPEYALDGFFSIKSDVFSFGIVLLEILSGKKNTGFFRSQQISSLLGYAWRLWTENKLLDLMDSAISETCNKNEFIKCAHIGLLCVQDEPGDRPTMSNILTMLDSETSIIPIPTQPTFFMTKQQSSSSSSSKLEINMQFDTSYQQGR* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4185 994 SMART blect_4 28 153 IPR001480 -
Tpr7g4185 994 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 992 - -
Tpr7g4185 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Tpr7g4185 994 ProSiteProfiles Protein kinase domain profile. 679 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4185 994 Pfam Protein tyrosine and serine/threonine kinase 682 949 IPR001245 GO:0004672|GO:0006468
Tpr7g4185 994 CDD STKc_IRAK 685 951 - -
Tpr7g4185 994 SMART ntp_6 342 426 IPR003609 -
Tpr7g4185 994 SUPERFAMILY Protein kinase-like (PK-like) 661 981 IPR011009 -
Tpr7g4185 994 CDD B_lectin 29 153 IPR001480 -
Tpr7g4185 994 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 178 IPR036426 -
Tpr7g4185 994 Pfam S-locus glycoprotein domain 236 308 IPR000858 GO:0048544
Tpr7g4185 994 Gene3D Transferase(Phosphotransferase) domain 1 755 957 - -
Tpr7g4185 994 Gene3D Phosphorylase Kinase; domain 1 653 754 - -
Tpr7g4185 994 ProSiteProfiles Bulb-type lectin domain profile. 22 151 IPR001480 -
Tpr7g4185 994 Gene3D - 17 151 IPR036426 -
Tpr7g4185 994 ProSiteProfiles PAN/Apple domain profile. 333 429 IPR003609 -
Tpr7g4185 994 SMART serkin_6 679 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4185 994 Pfam D-mannose binding lectin 77 168 IPR001480 -
Tpr7g4185 994 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4185 Tpr-Chr7 50950433 50954387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4185 669 967 Receptor kinase-like Gene Family AT4G23140 58.033 2.71e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g4185 PK_Tyr_Ser-Thr 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4185 - - gmx:100807185 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4185 7 50950433 50954387 Tpr7g4185 7 50950433 50954387 ECH
Tpr7g4185 7 50950433 50954387 Tpr7g4185 7 50950433 50954387 PCT