Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4182 ATGTTGGCGAAAACTTGTGAAAAAGGGGATGGATCTAAGTCCCTGGGTAAGATACTGGCAAGATGGAGGGAATATAATGCCCAACTTGAAGCCTCCTGCAACGACGGAGACAAGCCTGTTCGAAAAGTTGCAGCTAAGGGATCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGGCCTGAAAACTCGCGGTGTAACTATAGAGGTGTTAGGCAGAGGACTTGGGGGAAATGGGTTGCTGAAATCCGCGAGCCTAACCGAGGGAGTAGGCTATGGCTAGGTACTTTTCCAACTGCCATTGGTGCTGCTTTTGCTTATGATGAAGCAGCCAGGGCAATGTATGGTTCTTGCGCTCGTCTCAACTTTCCTAATGTTTCGGTTCCCAGATTCTCCGAGGAATCTTCAAACGATTCTCCAGATGCAAATCACTCTGGTTCCTCAATGACAGTATTGACAAATACTGAATCCATGATAATACCAAATAACTCAGGGATAGGAGGTGACGACGATACTGATATGGAACCTGTTTCCTTATCCGTAAGCGTCAAACAGGAGAATGAGGAAGGTGAATCAGGATAA 576 0.4618 MLAKTCEKGDGSKSLGKILARWREYNAQLEASCNDGDKPVRKVAAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAAFAYDEAARAMYGSCARLNFPNVSVPRFSEESSNDSPDANHSGSSMTVLTNTESMIIPNNSGIGGDDDTDMEPVSLSVSVKQENEEGESG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4182 191 Gene3D AP2/ERF domain 65 124 IPR036955 GO:0003700|GO:0006355
Tpr7g4182 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 164 - -
Tpr7g4182 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 164 - -
Tpr7g4182 191 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Tpr7g4182 191 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Tpr7g4182 191 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Tpr7g4182 191 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Tpr7g4182 191 MobiDBLite consensus disorder prediction 128 147 - -
Tpr7g4182 191 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Tpr7g4182 191 MobiDBLite consensus disorder prediction 152 191 - -
Tpr7g4182 191 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Tpr7g4182 191 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4182 Tpr-Chr7 50924797 50927333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4182 8 126 AP2-EREBP Transcription Factor Family AT2G40350 62.295 2.96e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr7g4182 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4182 - K09286 cam:101488673 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4182 7 50924797 50927333 Tpr7g4182 7 50924797 50927333 PCT