Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4129 ATGGAGTGGACTAGAGGCAACATCATCGGACATGGCTCATCCGCCACCGTCTACCTCGCCACCTCTCGTAGCTCCACTGATGTCTCCGCCGTTAAATCAGCGGAGACATCATTATCAAACTCAAAACAACTCCAGAGAGAACAGAGAATTCTTTCTTCTTTGTCCTCTCCTTACATAGTTAGCTACAAAGGTTGTAACATTACTAAGGAAAATAACAAGAAATTGTTCAATCTCTTCATGGAGTACATGCCCTTTGGAAACCTCTCTCAGGCGACTCGCGGTGGCCGGCTCAACGAGGCGACGATAGCACACTACACAAGACAAATTGTGGAAGGACTTGAATACTTACATTCAAAAGGTGTTGTGCATTGTGATATCAAAGGTAGTAACATATTGGTTGGTGAAAAAGGAGTTAAAATTGGAGACTTAGGTTGTGCAAAGATGATCGATGAAATTGCGCCGATTGCCGGAACTCCATTGTATATGGCGCCGGAAGTGGCGCGCGGTGAAGAACAAGGGTACCCTAGTGATGTTTGGTCACTTGGATGCACAATTGTTGAAATGGCAACTGGGTTTTCACCTTGGTCCAATGTAGATGACCCTGTTCATGTTCTGTTTCGTGTTGCATATTCTGATGAAGTTCCTATGATTCCTTGTTTTTTGTCAGAACAAGCTATGGATTTCTTGGAGAAGTGTTTTAAGAGAAATTCTAAGGATAGATGGAGTTGTAGTCAATTGTTGAATCATCCATTTCTTGTTGATTTTGATTCTGGTGTTGAGAAAATTCAAGAATTTGATACATGTTCACCAACTAGTATTCTTGAACAGGGCTTTTGGAATTGTGATGAAGATTCAGAAAGTTTGTTTTTTGATGATTTGGGTAAGACTAATTTTGTGAATTATCCTATTGGTAGGATAAAAAAGTTAGCTTTATGTTCAAGGGATCATCCATGTTGGAAATGGGGTGATGATAATTGGATCACAATTAGAGGGAATGATGCAGATGCAGATGCAGCAGAGGCTTCAATTAGTGATGATTTAGATAAAAGTGATTTTAGTGATAGAATTAGTGGTGATTATTTTTGTGAGGATTATAATAATGGTAAGATTAGGGATTCTAGTTTTTTAGTTAATAGTCTTAATTTTGAGAGAGGCATTGGAAGGTTGATGCCCCATTCAACATTAGATTTTTTATGA 1197 0.391 MEWTRGNIIGHGSSATVYLATSRSSTDVSAVKSAETSLSNSKQLQREQRILSSLSSPYIVSYKGCNITKENNKKLFNLFMEYMPFGNLSQATRGGRLNEATIAHYTRQIVEGLEYLHSKGVVHCDIKGSNILVGEKGVKIGDLGCAKMIDEIAPIAGTPLYMAPEVARGEEQGYPSDVWSLGCTIVEMATGFSPWSNVDDPVHVLFRVAYSDEVPMIPCFLSEQAMDFLEKCFKRNSKDRWSCSQLLNHPFLVDFDSGVEKIQEFDTCSPTSILEQGFWNCDEDSESLFFDDLGKTNFVNYPIGRIKKLALCSRDHPCWKWGDDNWITIRGNDADADAAEASISDDLDKSDFSDRISGDYFCEDYNNGKIRDSSFLVNSLNFERGIGRLMPHSTLDFL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4129 398 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4129 398 Pfam Protein kinase domain 5 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4129 398 ProSiteProfiles Protein kinase domain profile. 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4129 398 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Tpr7g4129 398 Gene3D Transferase(Phosphotransferase) domain 1 2 286 - -
Tpr7g4129 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tpr7g4129 398 SUPERFAMILY Protein kinase-like (PK-like) 3 274 IPR011009 -
Tpr7g4129 398 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 352 - -
Tpr7g4129 398 CDD STKc_MAPKKK 2 252 - -
Tpr7g4129 398 PANTHER MAP KINASE KINASE KINASE 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4129 Tpr-Chr7 50386214 50387589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4129 1 280 MAP Kinase Kinase Kinase AT2G32510 52.397 1.63e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr7g4129 Pkinase 2.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4129 K20716 - pvu:PHAVU_005G115900g 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4129 7 50386214 50387589 Tpr7g4129 7 50386214 50387589 ECH
Tpr7g4129 7 50386214 50387589 Tpr2g3141 2 35392039 35393640 ECH
Tpr7g4129 7 50386214 50387589 Tpr7g4129 7 50386214 50387589 PCT