Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4128 ATGGATACCACAATTAACAACAATAACAAAAACAAAAACAAGTCTCCATCTACAACAATCCCTTTTCAAGTCAACCTTACCTCTTCTAATGACTCACTTTCTGATCATGATGAAAACAGACCCATCATCAATGAACTTGACTTTTTCTCTACAAATAACCATGAAAATATTGCTTCTTCTTCCACTTCTGCACCTCCCTATCATCATATACATGATCATTACACCAATCCTTCTTCTCTCTTGGAATTGAAAGTAAACACTAGTTTGAATCTTCTTACCACCAACGCAAGCAATGATCAATCCATGGTGGATGCTGACATACCAAGTAATTCAGAAGACAAAAGAGGTCAACTTGAGGCCGTTGTTCTTCAAGGTGAGCTTGAGAGATTGAAGGTAGAGAATCATCAACTGAGGAACATGCTCGAAGAGCGCAATCGGAATTACAGCACATTGCAGATGCATTTGGTGAGTTTGATGCAAGAGAGAAAGGTAGAGGATTGTAATGAAGATAAAAAACAAGTAGAGATGAAACAAAATGGAAATGGTGGATTTTTGGTTCCAAGGCAATTTATGGAGCTTGGATTAGCTACTAATAATTCTAATGTTGCTGCTGATGAACCAAGAAGTCAAGATCAGTCAAAAGCAGTTGGAAACAACAATGAAGAAGGTTCCAAGGATGAAGCACTTGTGCCTGATCATGATATGAAGGAATCTGATAAGGGAAATGAACGAGACGATAGTCCTCCGAATCGAGTTTTACCTGCTAATAATAGTAATAATGTTCCAAATTTTAGTCCTCAAACTAATGTTGAACAAGCTGAGGCTACCATGAGGAAAGCACGAGTTTCGGTTAGGGCTCGATCGGAGGCTGCTATGATCAATGATGGATGCCAATGGAGAAAGTATGGACAGAAAATGGCGAAAGGAAACCCATGTCCTCGAGCTTATTATCGATGCACTATGGCTCACGGCTGTCCAGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAGATCAATACTCATAACAACATATGAAGGAAATCACATTCATGCATTGCCACCAGCAGCTATGGAAATGGTACAAACAACATCAGCAGCTGCAAGAATGCTTTTATCAGGACCAATGACAAGTCCTGATGGCCTAATGAATCCAAATTTCCTCACAAGAGCAATCCTTCCTTATTCATCAAGCATAGCAACTATCTCGGCCTCAGCACCATTTCCAACTGTTACATTAGACTTAACCGAACCACCAAATTCAAACCAATTCCCTAACAATAAGAACACAAATCAGTTCCAATTTCCGTTCGCTCAAAATTTTGCAAACTCATTACTACCTCAGATATTCGGTCAAACATTGCTTAACCAAACAACATTTTCAGGACTTCAGATGTCACAAGATGGAGAAAATTCTCAATTGGGTAATCAATCTCAGCAACAACTTGCTGACACAGTTACTGCTATTGCATCTGATCCTAACTTCACTACAGCATTGGCAGCTGCTATTACTTCCATTATTGGAGCTGCACAACCAAACAATGGTAACAACAGTACTATTAATAATGGTAACAGTACTATAGCCAACAATAATAATGGCAATGTTACATCTAATAACAATGCCAATGGAAGCAATAAAGGCAACAATCCTAATTCACCAGGAAACTAG 1668 0.3903 MDTTINNNNKNKNKSPSTTIPFQVNLTSSNDSLSDHDENRPIINELDFFSTNNHENIASSSTSAPPYHHIHDHYTNPSSLLELKVNTSLNLLTTNASNDQSMVDADIPSNSEDKRGQLEAVVLQGELERLKVENHQLRNMLEERNRNYSTLQMHLVSLMQERKVEDCNEDKKQVEMKQNGNGGFLVPRQFMELGLATNNSNVAADEPRSQDQSKAVGNNNEEGSKDEALVPDHDMKESDKGNERDDSPPNRVLPANNSNNVPNFSPQTNVEQAEATMRKARVSVRARSEAAMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAHGCPVRKQVQRCAEDRSILITTYEGNHIHALPPAAMEMVQTTSAAARMLLSGPMTSPDGLMNPNFLTRAILPYSSSIATISASAPFPTVTLDLTEPPNSNQFPNNKNTNQFQFPFAQNFANSLLPQIFGQTLLNQTTFSGLQMSQDGENSQLGNQSQQQLADTVTAIASDPNFTTALAAAITSIIGAAQPNNGNNSTINNGNSTIANNNNGNVTSNNNANGSNKGNNPNSPGN* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4128 555 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g4128 555 PANTHER OS05G0567200 PROTEIN 16 534 - -
Tpr7g4128 555 Gene3D WRKY domain 278 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g4128 555 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g4128 555 SUPERFAMILY WRKY DNA-binding domain 286 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g4128 555 Pfam WRKY DNA -binding domain 294 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g4128 555 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g4128 555 MobiDBLite consensus disorder prediction 225 247 - -
Tpr7g4128 555 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 534 IPR044810 GO:0003700
Tpr7g4128 555 Coils Coil 120 147 - -
Tpr7g4128 555 MobiDBLite consensus disorder prediction 202 271 - -
Tpr7g4128 555 MobiDBLite consensus disorder prediction 251 271 - -
Tpr7g4128 555 MobiDBLite consensus disorder prediction 202 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4128 Tpr-Chr7 50373702 50377851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4128 37 515 WRKY Transcription Factor Family AT1G62300 46.693 1.29e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g4128 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4128 - - gmx:100127384 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4128 7 50373702 50377851 Tpr7g4128 7 50373702 50377851 ECH
Tpr7g4128 7 50373702 50377851 Tpr7g2641 7 33612339 33615385 ECH
Tpr7g4128 7 50373702 50377851 Tpr2g3138 2 35374387 35377231 ECH
Tpr7g4128 7 50373702 50377851 Tpr7g4128 7 50373702 50377851 PCT