Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g4118 | ATGGACGAGGTTCCTGTGATTGAAGAAAATGAAACAAAGTCTGAAGCGCATTTGACTTCTGCTGCTGCTTTTGTGGAAGGTGGAATTCAGGATGCTTGTGATGATGCTTGCAGTATATGCCTTGAAGCTTTTATTGATAGTGATCCTTCAACGGTGACGAGTTGCAAGCATGAGTTTCATCTTCAATGTATTCTGGAATGGTGTCAAAGGAGTTCCCAGTGCCCCATGTGTTGGCAATCTATCAGTCTCAAGGATCCAACAGGCCAGGAATTGCTTGAGGGTGTTGAAAGAGAGAGGAACTTTAGGGTCAATCCGTCTAGAAATGCTACAATATTTCATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCAAATGATGCTGATCTTGAAGAGCGTATAATCCAACACTTAGCTGCTGCAGCAGCAATGGGGCGAGCACGCCATATTGCTAGAAGGGAAGGCCAGAGAAATAGGTCATCAGCTCAAGGTCGCCCACAGTATTTGGTATTTTCAGCTCATCCTAATTCACCTCCCATGGCTGCTGCTTCTTCCTCTCCACCTCAGAGAGGGGATGGTGAATCAACTCCTTCTATCACTCTATCTCCAACTTTTTCGACTGGAGAAGAACCACCACAGCTTACTTTAGTTCACCCAGTTCAAACCGACCAGGTTTCTGCTTCAGGATCCGGGTCTACGGCTCTTGCTACTGACAATCAGGGATTATCTTATAACAACAGGAGATCTCCTAATCAGTCTTCTCCAAGTAGCCAAGACAGAGCAGGACCATCAGATCTCCAGTCGTTTTCAGATTCTCTGAAATCAAAACTAAATGCCGTGTCTACAAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGGTGGAAGGAGAGGTGGTTCTCACGGAACAGCTCTGTAACTGATCTTGGATCTGAAGTTAGGAGAGAAGTTAATGCAGGGATTGCAACTGTGTCACGAATGATGGAACGCTTGGAGACCAGAGACAATAATAGACCCAGTAGCAATTCTTCTCCAAGTAATTCAGAGGATGGTCCAGTTCAGGAATCAAATGATCGGCATTTAACAGACACTGAAAGGGACAGTCCTTTGATAGACAATAACACCAAAACATCTTGCACTGCAGGTTCTAGTTCAAATTAA | 1173 | 0.445 | MDEVPVIEENETKSEAHLTSAAAFVEGGIQDACDDACSICLEAFIDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEGVERERNFRVNPSRNATIFHHPTLGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQYLVFSAHPNSPPMAAASSSPPQRGDGESTPSITLSPTFSTGEEPPQLTLVHPVQTDQVSASGSGSTALATDNQGLSYNNRRSPNQSSPSSQDRAGPSDLQSFSDSLKSKLNAVSTRYKESISKSTRGWKERWFSRNSSVTDLGSEVRREVNAGIATVSRMMERLETRDNNRPSSNSSPSNSEDGPVQESNDRHLTDTERDSPLIDNNTKTSCTAGSSSN* | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 182 | 275 | - | - | |
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 174 | 275 | - | - | |
Tpr7g4118 | 390 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHF2A | 9 | 390 | - | - | |
Tpr7g4118 | 390 | SMART | ring_2 | 37 | 77 | IPR001841 | - | |
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 375 | 390 | - | - | |
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 333 | 390 | - | - | |
Tpr7g4118 | 390 | SUPERFAMILY | RING/U-box | 30 | 84 | - | - | |
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 357 | 374 | - | - | |
Tpr7g4118 | 390 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 77 | IPR001841 | - | |
Tpr7g4118 | 390 | MobiDBLite | consensus disorder prediction | 341 | 356 | - | - | |
Tpr7g4118 | 390 | Pfam | Ring finger domain | 36 | 77 | IPR001841 | - | |
Tpr7g4118 | 390 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 86 | IPR013083 | - | |
Tpr7g4118 | 390 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 9 | 390 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g4118 | Tpr-Chr7 | 50250301 | 50254466 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g4118 | 34 | 85 | C3H Transcription Factor Family | AT5G15790 | 44.231 | 5.98e-12 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g4118 | K19043 | - | gmx:100780275 | 600.897 |