Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4108 ATGGATGTTGATTCTTCGATGGTTCCGGAACCTGATCATGATCCTATTGCGGCGAATCAAACTGTTTCTTCTCCGGCGCGGGAGGTTGTAGAAGGAGAAAAAGTTACCGAACAACCGCCGGCGGAGTCTGGCGGTGGATCTCCGGCGGAGGTGCAGCAACAGCAAGGGGGGAATGATGTGCAGCAAGGTACGGTTGTTGGACCGAGGTTGGCGCCGAATTACACTGTGGTGAATGCGATTTTGGAGAAGAAGGAGGACGGTCCGGGGCCGAGGTGTGGACATACGTTGACGGCGGTGGCGGCTGTTGGAGAGGAGGGGACGCCGGGGTATATTGGTCCGAGGTTGATTTTGTTTGGTGGTGCTACTGCACTTGAAGGAAATTCCGCGGCTTCGGGGACTCCTTCATCAGCTGGAAATGCTGGAATACGTTTGGCTGGTGCCACGGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGCTTACTCCCTATGGAGAACCTCCAACACCAAGGGCTGCCCATGTGGCAACTGCCGTGGGAACCATGGTGGTTATTCAGGGTGGTATTGGTCCTGCTGGTTTGTCGGCAGAAGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCTCGATGGCATAGAGTGTCTGTCCAAGGCCCCGGACCAGGGTCACGCTATGGACATGTAATGGCTTTGGTGGGCCAGCGGTATCTTATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCTTTGGACACAGCTGCTAAGCCATATGAATGGCGCAAGTTAGAGCCAGAAGGAGAGGGTCCTCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCTAGTGCATATGGACTTGCTAAGCATAGAGACGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTGCATGTGTCTGGTGGAGCTCTTGGTGGAGGACGGATGGTCGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCACTCCAAGAACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGACGCAGCAGTTGAGTTGACTCGACGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTGATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGTTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACGACTGCTGCTTCACATGCTGCTGCAGCAGCAGCTTCATCCAATGTACAAGCAGGACGCTTGCCTGGACGATATGGATTTGATGATAGGCCAAGGCAAACAATGACTGAAGTGGCTGCTGATGGTTCTGTTGTATTGGGAAATCCAGTTGCACCCCCAATGAATGGCGACATTTATACTGACATTAGCACTGAAAATGCCATACTTCAGGGACCTCGAACTGCCAAAGGAGTTGAGTATCTGGTGGAAGCATCTGCTGCAGAAGCCGAAGCTATTAGTGCCGCACTGGCTGCTGCCAAGGCAAGGCAAGAGAATGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCTGAGGCTACCCCAAGTGGGAAGCACACATCTTCCTTGATTAAGCCTGACTCTGTAGGGTCAAATAACAGTGCTTCTGGCGGAGTTCGGCTGCATCACAGAGCTGTAGTTATTGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTCGACAGCTTTCAATTGATCAATTTGAAAACGAAGGCAGGCGGGTCAGTTATGGGACTCCGGAAAATGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCCATCAATAGTGTGCCAAAAAAGGTTATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGACAATTTTTCCTAGATTGTAATGAAATTGCTGATCTTTGTGATAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTACAACTTAGTGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTTTTTGACGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCGGATATTAATGCCCTTTTTGGTTTTCGAATTGAATGTATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACGTGGCATCGGATTAACCGGCTATTTAATTGGCTTCCTCTAGCTGCTTTAATTGAGAAAAAGATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCATGTAGAACAGATTGAGAATATTCAGCGACCAATTCCAATGGAAGCGGGGTCAATTGTGCTTATGGATCTGTTGTGGTCTGATCCTACAGAGAATGATAGCGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCTGGATTAGTTACGTTTGGGCCTGATCGAGTCATGGAATTTTGCAACAACAATGATCTTCAGCTAATTGTCCGTGCACATGAATGTGTAATGGATGGGTTTGAGCGTTTTGCCCAGGGACATCTGATCACACTTTTCTCGGCTACAAATTATTGTGGCACCGCAAATAATGCCGGAGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCAAAACTCATTCATCCATTACCGCCTGCAATTTCTTCACCAGAAACGTCACCAGAAAGGCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGTCGTCCCCCAGGTACAAATGACAGAGGTTCGCTCGCTTGGATATAG 3012 0.4811 MDVDSSMVPEPDHDPIAANQTVSSPAREVVEGEKVTEQPPAESGGGSPAEVQQQQGGNDVQQGTVVGPRLAPNYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRLTPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAASSNVQAGRLPGRYGFDDRPRQTMTEVAADGSVVLGNPVAPPMNGDIYTDISTENAILQGPRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKHTSSLIKPDSVGSNNSASGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLSAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPGTNDRGSLAWI* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4108 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1003 - -
Tpr7g4108 1003 SMART pp2a_7 672 956 IPR006186 GO:0016787
Tpr7g4108 1003 Gene3D - 636 974 IPR029052 -
Tpr7g4108 1003 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Tpr7g4108 1003 CDD MPP_Bsu1_C 652 954 IPR041758 -
Tpr7g4108 1003 MobiDBLite consensus disorder prediction 564 585 - -
Tpr7g4108 1003 Gene3D - 70 211 IPR015915 GO:0005515
Tpr7g4108 1003 MobiDBLite consensus disorder prediction 1 60 - -
Tpr7g4108 1003 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Tpr7g4108 1003 Pfam Kelch motif 332 378 IPR011498 GO:0005515
Tpr7g4108 1003 MobiDBLite consensus disorder prediction 546 585 - -
Tpr7g4108 1003 SUPERFAMILY Kelch motif 145 435 IPR015915 GO:0005515
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Tpr7g4108 1003 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Tpr7g4108 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1003 - -
Tpr7g4108 1003 MobiDBLite consensus disorder prediction 978 1003 - -
Tpr7g4108 1003 SUPERFAMILY Metallo-dependent phosphatases 657 963 IPR029052 -
Tpr7g4108 1003 PIRSF STPPP_BSU1 31 1003 IPR012391 GO:0004721|GO:0009742
Tpr7g4108 1003 Gene3D - 212 461 IPR015915 GO:0005515
Tpr7g4108 1003 MobiDBLite consensus disorder prediction 548 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4108 Tpr-Chr7 50120354 50132485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4108 664 899 Calmodulin-binding Proteins AT5G63870 29.412 2.47e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4108 - - gmx:100790406 1797.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4108 7 50120354 50132485 Tpr7g4108 7 50120354 50132485 ECH
Tpr7g4108 7 50120354 50132485 Tpr4g1463 4 14254946 14271382 ECH
Tpr7g4108 7 50120354 50132485 Tpr7g4108 7 50120354 50132485 PCT